Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g09984 | ATGGCCTCCTTAACTCTTGTTCATTCTTGTTCTCTGCTTCTTCTAATTCTCCCCTTGCTGCCATCTGTGTTTAGTTCAAACTGTGATGTACAGTTAAATTCCTCTCTACCCACCAATAGCCAATCTTCATGGAATTCACCATCTGGGGAATTTGCCCTTGGTTTCAAAAGTGTTATATTCACTGACACACAAACCATGTCCGTGCTTTCCATTTGGTTTGCCAAAGATCCCAACCATACCATAGTATGGTATGCAAAAGCAGAAAAAAGTCCAGCTTTTCCTGCAGGGTCCACAGTGAATCTGACAAGCAAAGGAATTGTTGTATATGATCCAAAAGGCAATGATATGTGGCATCGTCCAGAAAATAACGCTGGTGATGCCATAGTGTCTTGTGCTTCTATGCTAGATAATGGAAGTTTTGTTCTTCTAGATAAGGATGGTAAACAGCTTTGGGAGAGTTTTGATGAACCCACTGATACTATTTTGCCTGGCCAGAATCTAGCTAAGCCAAAGATTTTCAGAGCTCGTCATTCAGACACAAGTTTTTATGATGGGAATTTCATGCTAGCATGGCAGAATGATAGCAATTTGGTTCTTTACTATTCACCACCAGATTCTAAAACACAAGAACCTTACTGGGCTACTGGAACTTCCAAAACTGAATCAGAGCTGATATTTGATGAGTCTGGACGCATGTACATCCAAAATAAGACAGGTGTAGCAATCAGTGAAGTCACAAAAAGTGTACCAAAAGACTCATGGTACATGGCTAGGATTGATTCTGATGGAGTTTTCAGATTTTATTATCACCCCAAAACTGAGACCAATGTTGCTGACAGCTGCACTTCAGGTTGGAAAGTGCTGCAACAATATCCTGAAGATATTTGCCTTGTCTTCATGAAGGACATGGGAAGTGTTATATGTGGTTTTAACAGTTACTGTGTTACCATTAATGGTAAGCCTAATTGTGAATGCCCTGAGCATTATTCTCGTTTTGTTTATAATAATCTCACAAGTTGTAGACCGGATTTTCCACTACCCAGCTGCTACATAGAGGGGTGGGATCAGAATAAAGATCTAGTAGATTTCAAAGAGTATCCAAATGTGAACTGGCCTCTCAATGATTATGATCAGCTGATGGGTGAGGCAATGGACAAGGATATGTGTAAACAAAAATGCCTTGAAGATTGCTTCTGCTCTGTAGCCATAAATAATGATGCTGGACAGTGTTGGAAGAAAAGATATCCTTTGAGTAATGGAAGGAAACACCCTAACATCAATGGAACAATAGCTCTTGTCAAGGTACCTAAAACAAATTTGACCAAGCCTGACAAAGAACGGTCAAAACTGGTGCTTGTCATATCAATACTTCTTGGGAGCTCTGTGCTCCTCAATTTCATTCTATTTGTTGCTTTTTTTGTAGCCTTTTTCTTGTTCTACCACAGGAAGCTTTTGAATCCAGCTGCAATAACAACAACGACAAGGTGTTTTACATACAAGGAGCTTGAAGAAGCAACTTCAGGCTTCAAACAAATATTGGGTAGAGGTGCTTTTGGGAAGGTATATAAAGGGGTATTAACATCAGATACCAGCAGGTTTGTTGCTGTCAAGAAGCTTGATAAGGTTTTGCAAGAAGGTGAAAAGGAATTCAAAACAGAAGTGAGTGTGATTGGCCAAACCCACCACAGGAATTTGGTTCGTTTACTTGGTTACTGTGATGAAGGGGAGTATCGCCTTTTGGTCTATGAGTATATGAGTAATGGCTCACTAGCAAGTTTTCTCTTTGGGATTTCAAGGCCTCATTGGAATCAAAGAGTGCAAATTGCTTTAGGAATTGCAAGAGGTCTCACATATTTGCATGAAGAGTGCAGCACTCAGATCATTCATTGTGACATAAAGCCTCAGAACATACTCCTTGATGAGTTATTCACTCCAAGAATTTCTGATTTTGGATTAGCAAAGCGATTGTTGGCTGAGCAAACTAGAGCTGCTAAGACAGGTTTGAGAGGGACAATTGGTTACTTTGCACCTGAATGGTTTAGGAAAGCTTCAATCACAACTAAAGTGGATGTTTACAGTTTTGGAATTCTGCTGCTAGAGATCATATGCTGCAAATCAAGTGTTGCCTTTGCAATGGCAAATGAAGAAGAAGCACTCCTAGATTGGGCATATCATTGTTATAGCCAAGGAAAAGTAGCTAAATTGGTAGAAAATGATGAGGAGGCAAAGAATGACATAAAGAGGGTAGAAAAACATGTGATGGTAGCAATTTGGTGCATTCAAGAGGATCCTTCACTAAGACCCTCCATGAAGAAGGTCACCCAAATGCTTGAGGAAGTTACTGCAGTTTCTGTGCCTCCTCGCCCTTCCATGTTCAGTGTACAAGTTGAAACTTCATTTACTTCATAA | 2409 | 0.4006 | MASLTLVHSCSLLLLILPLLPSVFSSNCDVQLNSSLPTNSQSSWNSPSGEFALGFKSVIFTDTQTMSVLSIWFAKDPNHTIVWYAKAEKSPAFPAGSTVNLTSKGIVVYDPKGNDMWHRPENNAGDAIVSCASMLDNGSFVLLDKDGKQLWESFDEPTDTILPGQNLAKPKIFRARHSDTSFYDGNFMLAWQNDSNLVLYYSPPDSKTQEPYWATGTSKTESELIFDESGRMYIQNKTGVAISEVTKSVPKDSWYMARIDSDGVFRFYYHPKTETNVADSCTSGWKVLQQYPEDICLVFMKDMGSVICGFNSYCVTINGKPNCECPEHYSRFVYNNLTSCRPDFPLPSCYIEGWDQNKDLVDFKEYPNVNWPLNDYDQLMGEAMDKDMCKQKCLEDCFCSVAINNDAGQCWKKRYPLSNGRKHPNINGTIALVKVPKTNLTKPDKERSKLVLVISILLGSSVLLNFILFVAFFVAFFLFYHRKLLNPAAITTTTRCFTYKELEEATSGFKQILGRGAFGKVYKGVLTSDTSRFVAVKKLDKVLQEGEKEFKTEVSVIGQTHHRNLVRLLGYCDEGEYRLLVYEYMSNGSLASFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDELFTPRISDFGLAKRLLAEQTRAAKTGLRGTIGYFAPEWFRKASITTKVDVYSFGILLLEIICCKSSVAFAMANEEEALLDWAYHCYSQGKVAKLVENDEEAKNDIKRVEKHVMVAIWCIQEDPSLRPSMKKVTQMLEEVTAVSVPPRPSMFSVQVETSFTS. | 803 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g09984 | 802 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 68 | 217 | IPR036426 | - | |
Seca4g09984 | 802 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 585 | 785 | - | - | |
Seca4g09984 | 802 | FunFam | S-receptor-like serine/threonine-protein kinase | 481 | 584 | - | - | |
Seca4g09984 | 802 | ProSitePatterns | Protein kinases ATP-binding region signature. | 513 | 538 | IPR017441 | GO:0005524 | |
Seca4g09984 | 802 | Pfam | D-mannose binding lectin | 80 | 171 | IPR001480 | - | |
Seca4g09984 | 802 | Gene3D | - | 157 | 282 | IPR036426 | - | |
Seca4g09984 | 802 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 177 | 269 | IPR036426 | - | |
Seca4g09984 | 802 | FunFam | Serine/threonine-protein kinase | 158 | 299 | - | - | |
Seca4g09984 | 802 | CDD | PAN_AP_plant | 355 | 436 | - | - | |
Seca4g09984 | 802 | SMART | serkin_6 | 507 | 781 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g09984 | 802 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 35 | 788 | - | - | |
Seca4g09984 | 802 | ProSiteProfiles | Protein kinase domain profile. | 507 | 781 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g09984 | 802 | Gene3D | - | 24 | 155 | IPR036426 | - | |
Seca4g09984 | 802 | CDD | STKc_IRAK | 513 | 779 | - | - | |
Seca4g09984 | 802 | SMART | blect_4 | 35 | 157 | IPR001480 | - | |
Seca4g09984 | 802 | Coils | Coil | 732 | 752 | - | - | |
Seca4g09984 | 802 | Gene3D | Phosphorylase Kinase; domain 1 | 482 | 584 | - | - | |
Seca4g09984 | 802 | SUPERFAMILY | Protein kinase-like (PK-like) | 487 | 778 | IPR011009 | - | |
Seca4g09984 | 802 | PIRSF | SRK | 1 | 802 | IPR024171 | GO:0004674 | |
Seca4g09984 | 802 | Gene3D | Transferase(Phosphotransferase) domain 1 | 585 | 785 | - | - | |
Seca4g09984 | 802 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 627 | 639 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g09984 | 802 | Pfam | Protein kinase domain | 510 | 775 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g09984 | 802 | ProSiteProfiles | Bulb-type lectin domain profile. | 29 | 155 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g09984 | Seca-Chr4 | 232795627 | 232798035 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g09984 | 497 | 778 | Receptor kinase-like Gene Family | AT1G60800 | 45.862 | 2.52e-70 | 240 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Seca4g09984 | Pkinase | 1.9e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g09984 | - | - | gmx:100796323 | 1262.67 |