Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09982 ATGGACGCCACCCACACCATGTTTTGTAACAATGATTTGGTTAACCCTCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTTGTCTCACATTTCTTCAATGTTGTGCTTAGAACCGTGGGTCAACCTGGACCCATTGCACAAATTCTGGCTGGGTTGGTGCTAGGTCCAATGTCTCACATTGAGTATATAAAAAAGTTATTCTTTCCTGCAAGTTCTATAAATTACTATGAAGTTGTGAGCTTCTTCTGTCGCATACATTTCATGTTCTTATTTGGGTTAGAGATGAATATTCACTATACCATGCGCAATCTACGCTTGGTCAGCTTGGTAGCATGTGGTGGTGCACTAATGGGTGGTGTTTTTGGTCTCTCTGTCTCTTTTTATTTGTATCAAGAGTTAGATAGCAATGCCCCCATTTATTATTTTAGCATGATCATTATGTTAGTGGTATCATACACAAGCTCCCCTATGGTGATTCGTTTGGCAGCTGAATTGAGGTTTGTTGCATCAGATGTTGGGAGAATTGCAGTGTCTTCTGCATTGATTACAGAAATAGGTTGCTTGTTGTTCTTTAATGTGATGGTTAACTGGAAAAGAGAAAACCACATTTCTACTGGTATAGGTTGCATTGTAGTCACTGCCCTTGTGATTGTTATAAATAGGTACTTAGCTGTTTGGTTAAATGCAAGACATAGGAACCAGAAGTACCTCAAGGCTCCTGAGCTCTTATTCATCCTGTTTTTGCTTGTAACTAGCTCAATGATTATAGAAATTTGGGGTTACAACAGTGTTATTAGTTGTTTTATCATTGGCTTGTTGTTTCCTAAGGAAGGGAAAACAGCTAGAACATTGCTACATAAACTTGGTTATTCTATTTACAACTTTGTTCTTCCAGTATATTTTGGGTACTTGGGTTTGCAATGTGACATAATAACTGTCTTCAAGAGCTTGTCTCAGACAACAAATACAGCGATATTGATTTTGTTGAGCATTGGTGGCAAGCTTGGTGGTACTCTTATAGTTTGTCGTTACCTTCAAATTCCTACTAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACAAGAGGTTATGCTGATCTGTTATTCATTGGTGCAGCAGCAAAGCAAGTAATTACTTTTAATACAGAAGCTTACAATGTGTTGCTAGTGTCAATAGTATTCAACACAATCATATCAGGAATAATAGTGGCTTTTCTAGCAAGAGGGGAAGAGAAAATGTTTGCAAATAACCATACTGCAATTGAACCTCAGCAATTGGAGGATGAGCTTAGAATTCTTGCTTGTGTATATGATCCTCGTCAAGTATCTGCCATACTTTCCACAATACTAGCAATACATGGTTCTAGACAAGCACCATCTACTATTTATCTAATGCACCTAATAGAGCTTGTGAAGAAAATCAAGTCTAACTTGTTATACCATGAAAAAGAAAATGAAGACCTTAGTGATGATGAGGACTATGGTGGCAATGATGTTGTGGAAATTAATAATGCTTTAGATGCCTTCACTGCAGACACAAAGATTTTGGTCCACCAAAGAAGGGCAGTTTCTTCTTTCTCTAGTTTGTATGAAGATGTTTGCAATGAAGCTGAAGATCTTCAAGTATCCATTATTCTACTTCCCTTTCACAAGCATCAGAGGATTGATGGAAAATTGGAAAGTGGGAAAGAAGGTATAAGGATTACTAATCAAAAAGTTCTTAGACATGCCCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACTTTCTAAGGTCCCTGGTTTTGCACAACTAGTTGGATCTGAAGCCATACAAAATGTTGCAACACTTTTCTTTGGAGGACCAGATGATCGTGAAGCTATTGCTTGGAGCCTACGCATGTCCACAAGCCCTCGAATTAACTTGACAATCATCAGATTTCTGTTGTCTTCTTCATCACAGAATGAACACATTGAAAGTGGACAATCTGAGGAGAAAGAGATTTTAATGTCATTGTCTGGGGAAGAGACTGTGAATGAGATTGACAATACCTTTATGGTTGATTTCTATAATAGGTATGTGACTTCTGGTCAAATTGGATATGTGGAAAAGTTTGTGAAGGATGGAACACAAACAGTGGAATATTTGAAAGAGATAGGGGACATGTACTCTTTGTTTATAGTAGGAAAGGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTGACTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGTTCAGTTTTGGTTATTCAACAGCATAGAGATGCCAAGAAAGGACTAATGCACGATTAG 2343 0.3824 MDATHTMFCNNDLVNPLSSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHIEYIKKLFFPASSINYYEVVSFFCRIHFMFLFGLEMNIHYTMRNLRLVSLVACGGALMGGVFGLSVSFYLYQELDSNAPIYYFSMIIMLVVSYTSSPMVIRLAAELRFVASDVGRIAVSSALITEIGCLLFFNVMVNWKRENHISTGIGCIVVTALVIVINRYLAVWLNARHRNQKYLKAPELLFILFLLVTSSMIIEIWGYNSVISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDIITVFKSLSQTTNTAILILLSIGGKLGGTLIVCRYLQIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFNTEAYNVLLVSIVFNTIISGIIVAFLARGEEKMFANNHTAIEPQQLEDELRILACVYDPRQVSAILSTILAIHGSRQAPSTIYLMHLIELVKKIKSNLLYHEKENEDLSDDEDYGGNDVVEINNALDAFTADTKILVHQRRAVSSFSSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLSKVPGFAQLVGSEAIQNVATLFFGGPDDREAIAWSLRMSTSPRINLTIIRFLLSSSSQNEHIESGQSEEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGTQTVEYLKEIGDMYSLFIVGKGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLMHD. 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09982 780 PANTHER CATION/H + ANTIPORTER 10 771 - -
Seca4g09982 780 Gene3D - 19 417 IPR038770 -
Seca4g09982 780 Pfam Sodium/hydrogen exchanger family 27 409 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca4g09982 780 FunFam Cation/H(+) antiporter 1 19 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09982 Seca-Chr4 232783026 232785933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09982 11 780 Antiporter Super Family AT1G79400 39.744 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09982 K26731 - gmx:100804522 1378.62