Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09979 ATGTCATTTTCCAAATTGTTCAGATTCCAGAACCTACGACATTGTCTTCTATTCACACCAACCCCCTCTTATTCCTTCTCCTCATCATCTTCATTTTCATTACCTTTGACTCTGAGTAGGGTCACACTCACCACTAAAGCTTCGTTATCATCAGCCACAGCCACAGATATGGTGAAAGCTATCAGAGTTCATGAACTTGGTGGCCCTCAGGTTCTGAAGTGGGAGGATGTGGAAATCGGAGACCCCAAAGAAGGCGAGGTCCGTGTCAGGAACAAAGCCATTGGGGTTAATTTCATTGATATCTACTTTCGTAAAGGAGTTTACAAAGCCCCTTCTTCACCCTTCACTCCAGAGCTCAAGATACAATTGAACATATGCATTGATGATGACTTGCTTAACATTTCATTCAAAGTTAAGTTGATACCCCAAGGTATCATGTGTATTGAGTTCTTTTCCTGTTTTAATGTGGCAGGTATGGAAGCTGTTGGGGTTGTGACAGCTGTGGGTGCTGGACTCACTGGTGTGCAGGTTGGAGATCTTGTAGGTTATGTAGGTCAACCAATGGGCTCATATGCTGAAGAGCAGATTCTTCCTGCAAATAAAGTTGTCCCCATCCCTCCTTCTATTGAGCCAGCTATTGCAGCTTCCATCCTGTTGAAGGGCATGACAGCTCAATTTTTAATTCGAAGTTGTTTCAAGGTTGAACCTGGTCACACAATTCTTGTCCATGCAGCAGCTGGTGGAGTTGGGTCCCTGTTGTGCCAGTGGGCAAATGCTCTTGGTGCAACTGTCATAGGAACTGTATCCAATAAAGAGAAAGCAGCTCAAGCCAAGGAGGATGGCTGCCATCATGTAATAATCTATAAAGAAGAGGATTTCGTTGCCCGCGTCAATGAAATTACATCTGGCAATGGAGTTGAAGTAGTCTATGATTCTGTAGGAAAGGACACCTTTGAGGGATCTTTGGCATGCTTGAAGCTTCGAGGCTACATGGTAAGTTTTGGGCAGTCATCAGGTACGCCTGATCCAGTTCCATTATCTTCCCTGGCTACAAAATCCCTGTTCTTGACAAGGCCCACCCTATTTCAATATGTTGTCACTCGAGATGAGCTATTGGAGTCTGCCGGAGAGTTGTTTGCTATTGTTGCTTCTGGTGTCTTGAAGGTCCGGGTTAATCATACTTACCCATTGTCTGAGGCAGCAAAAGCCCATGAAGACCTGGAGAATAGGAAGACCTCAGGATCTGTTGTGTTGATACCCTAA 1263 0.4473 MSFSKLFRFQNLRHCLLFTPTPSYSFSSSSSFSLPLTLSRVTLTTKASLSSATATDMVKAIRVHELGGPQVLKWEDVEIGDPKEGEVRVRNKAIGVNFIDIYFRKGVYKAPSSPFTPELKIQLNICIDDDLLNISFKVKLIPQGIMCIEFFSCFNVAGMEAVGVVTAVGAGLTGVQVGDLVGYVGQPMGSYAEEQILPANKVVPIPPSIEPAIAASILLKGMTAQFLIRSCFKVEPGHTILVHAAAGGVGSLLCQWANALGATVIGTVSNKEKAAQAKEDGCHHVIIYKEEDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKLRGYMVSFGQSSGTPDPVPLSSLATKSLFLTRPTLFQYVVTRDELLESAGELFAIVASGVLKVRVNHTYPLSEAAKAHEDLENRKTSGSVVLIP. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09979 420 Gene3D - 220 364 - -
Seca4g09979 420 SUPERFAMILY GroES-like 57 246 IPR011032 -
Seca4g09979 420 Gene3D - 57 121 - -
Seca4g09979 420 FunFam Quinone oxidoreductase 1 220 364 - -
Seca4g09979 420 Pfam Zinc-binding dehydrogenase 248 355 IPR013149 -
Seca4g09979 420 CDD QOR2 59 420 IPR047618 -
Seca4g09979 420 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 59 420 - -
Seca4g09979 420 Gene3D - 156 414 - -
Seca4g09979 420 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 211 370 IPR036291 -
Seca4g09979 420 SMART PKS_ER_names_mod 67 418 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09979 Seca-Chr4 232765910 232769854 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09979 K00344 - gmx:100793768 581.637