Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09968 ATGGCTTCTATGCAGATCCTATGGTCATGTACTCAGATTAATCCTCAGGGTTGTATTAGATACCCCCATGTCAAAGAATCAGACAGGATCAGTAGGAAAAGCTACGTAGTTAGATTTCAAGGTGGGGTTGTTCCAAATTTAGACCAAGGAAAAAAGAAGCTGAGTGTGTTAATAGCTGGTGGGGGCATTGGTGGGCTTGTTTTAGCTCTGGCTGCAAAGCATAGAGGGTATGATGTGAAGGTATTTGAGAAGGATCTCAGTGCAGTTAGAGGGGAAGGTAGACATCGTGGCCCAATTCAGCTCTTGAGTAGTGCTCTTGCTGTGTTGGAAACCATTGATCAGAATGTTGCAAAGCAGATAATGGAAGCAGGTTGTGTCACTGGCAATAGGACTAATGGCCTTGCTGATGGTGTATCTGGGGAGTGGTTCACTGAATTTGATCTTTTGACTCCTGCTTCAAGGAAAGGGCTTCCTGTTACCTTAGTCATATGTAGAATGACACTGCAAGATATATTAGTCAATGCAGTTGGTTCCAACATACTTAGAAACAAATCTAAAGTTGTGGATTTTGTTCAGGAATCTAGCAAGGTCAGAGTGATCCTTGAAAATGGACAGCACTATGATGGTGACATTTTAATAGGGGCAGATGGAATATGGTCAGAAGTACGTTCAAAGCTCTTTGGATGGCAGGAAGCAAAGTACTCAGGTTACACATGCTATAGTGGATTAACAAATTATGTGCCCCCATATATTGATACTATAGGGTATCGTGTGTTCTTGGGATTGAACCAGTACTTTGTTGCCTCAGATGTTGGCAATGGGAAAATGCAGTGGTATGCTTTCCATGGGGAACCCCCTTCAAGTGCCCCTTTCCCAGAAGGTAAGAAGAAGAGACTAATGGATCTATTTGATAAGTGGTGCAATGAAGTGATCACACTCATATCAGAAACACCAGAGGATATGATTCTGCAGAGGGATATATATGATAGAGACATGATCCACACTTGGGGGATTGGGAGAGTGACTTTATTAGGTGATGCAGCACATCCAATGCAACCAAATCTTGGTCAGGGGGGATGTATGGCAATAGAGGTTGGTTATTTATAA 1107 0.4255 MASMQILWSCTQINPQGCIRYPHVKESDRISRKSYVVRFQGGVVPNLDQGKKKLSVLIAGGGIGGLVLALAAKHRGYDVKVFEKDLSAVRGEGRHRGPIQLLSSALAVLETIDQNVAKQIMEAGCVTGNRTNGLADGVSGEWFTEFDLLTPASRKGLPVTLVICRMTLQDILVNAVGSNILRNKSKVVDFVQESSKVRVILENGQHYDGDILIGADGIWSEVRSKLFGWQEAKYSGYTCYSGLTNYVPPYIDTIGYRVFLGLNQYFVASDVGNGKMQWYAFHGEPPSSAPFPEGKKKRLMDLFDKWCNEVITLISETPEDMILQRDIYDRDMIHTWGIGRVTLLGDAAHPMQPNLGQGGCMAIEVGYL. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09968 368 Pfam FAD binding domain 54 226 IPR002938 GO:0071949
Seca4g09968 368 Gene3D - 55 368 IPR036188 -
Seca4g09968 368 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 - -
Seca4g09968 368 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 208 223 - -
Seca4g09968 368 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 55 77 - -
Seca4g09968 368 PANTHER - 49 366 - -
Seca4g09968 368 SUPERFAMILY FAD/NAD(P)-binding domain 54 365 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09968 Seca-Chr4 232668900 232672579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09968 181 368 Miscellaneous Gene Families AT4G38540 26.570 4.58e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09968 K09838 - gmx:100778602 581.637