Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09966 ATGGATTACGAGCCCTACGACAGTAGCGGAACTGATGATGATCTTCCGCCAACTCATCAAAATAGAATTCCCAGGGGAGGAGGAGGACGTCTTGCTGGGAATGGAAGATCTGCTGTTGGTTCAATTCCATACCCCAGGATGTATGGTGAAATTGATATGGAAACCCAAATTCATCAACTTGAGCAGGAAGCATACAGTTCAGTTCTAAGAGCCTTTAAAGCTCAAGCTGATGCCATCACTTGGGAGAAAGAAAGTTTGATTACAGAGCTAAGAAAAGAACTGAGATTATCAAATGAGGAACACAGAGAACTTCTGGGTCGGGTTAATGCGGATGACATGATACGGAGGATAAGGGAATGGAGACAGGCAGGTGGCCATCAACCTGGGGTACTGAGTACTGGTCAAGCTCTTCATGATCCAGCTCCCAGTCCAACGGTGTCTGCATCTCGCAAAAAGCAGAAGATTACACCATCTGTACCATCACGTTCTTTTGGTGGGCCCTCTCCTCCATTTCACCCCCAAACAGTGACTGCACCCCACCAACCATCTTCTTCTGCAGCAAAAAGAGGATCTGTTCCGGGATCCAAAGGAAAGAAGCACAAACCTGGTCAAGTTTTACCTGGTGTATCTTCAATGAAGCAGTATCCTTCCTCAGGACCAGGTGGAAGGAATCAAGTACCTAATAGAGCTGTCATGGGTGAGCATGCTGAGGGAGCATCATTTGATTCATTGATTGGTAGGAGAGTACGGACAAGATGGCCTGACGACAATAACTTCTATGAAGCTGTCATCACTGACTACAATCCAGCTGATGGACGACACAATCTGGTCTATGACATGGGGAGTACAAATGAAACATGGGAATGGGTTAATCTGTCAGAGATATCTCCTGAAGATATTCAGTGGGTAGGTGAGGATCCTGGAATTAATCATCGTGGGGGTTTTGGAGGCTCTGGTCATGGGATGAATAGGTCTGTAGGGCGTGATGGTGTTCCTGGAGCTGGAAGAGGTAGAGGAGTTACAAAGGGGCAATCTAGAAAAGAGTTTTTGTCATCACAGAATGGCATAGGAAAGAAGGCTCCTGATGACATACAAATACTTCACACAGACACACTAATCAAGGAGGTTGAGAGGGTATTCAGTGCAAATCATCCTGATCCCCTTGAAATTGAGAAAGCCAAGAAAGTATTGAAGGACCATGAGCAGTCTCTTGTTGATGCAATTGCAAGACTCGCTGATCTTTCTGATGGTGAAAGTGATGGGGCTGGCCACCATTTCTCACATGCTCAATCGATGGATCGAGAATGA 1308 0.4595 MDYEPYDSSGTDDDLPPTHQNRIPRGGGGRLAGNGRSAVGSIPYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDMIRRIREWRQAGGHQPGVLSTGQALHDPAPSPTVSASRKKQKITPSVPSRSFGGPSPPFHPQTVTAPHQPSSSAAKRGSVPGSKGKKHKPGQVLPGVSSMKQYPSSGPGGRNQVPNRAVMGEHAEGASFDSLIGRRVRTRWPDDNNFYEAVITDYNPADGRHNLVYDMGSTNETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGMNRSVGRDGVPGAGRGRGVTKGQSRKEFLSSQNGIGKKAPDDIQILHTDTLIKEVERVFSANHPDPLEIEKAKKVLKDHEQSLVDAIARLADLSDGESDGAGHHFSHAQSMDRE. 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09966 435 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 53 140 IPR005491 -
Seca4g09966 435 Gene3D - 242 297 - -
Seca4g09966 435 SUPERFAMILY Tudor/PWWP/MBT 243 283 - -
Seca4g09966 435 MobiDBLite consensus disorder prediction 210 224 - -
Seca4g09966 435 Pfam ENT domain 55 123 IPR005491 -
Seca4g09966 435 FunFam Protein EMSY-LIKE 3 isoform A 48 178 - -
Seca4g09966 435 MobiDBLite consensus disorder prediction 416 435 - -
Seca4g09966 435 Coils Coil 390 410 - -
Seca4g09966 435 MobiDBLite consensus disorder prediction 138 162 - -
Seca4g09966 435 Coils Coil 87 107 - -
Seca4g09966 435 SUPERFAMILY ENT-like 48 164 IPR036142 -
Seca4g09966 435 CDD Tudor_Agenet_AtEML-like 245 295 - -
Seca4g09966 435 PANTHER PROTEIN EMSY-LIKE 4 11 420 IPR033485 GO:0050832
Seca4g09966 435 MobiDBLite consensus disorder prediction 125 228 - -
Seca4g09966 435 MobiDBLite consensus disorder prediction 1 38 - -
Seca4g09966 435 Gene3D ENT domain 48 158 IPR036142 -
Seca4g09966 435 MobiDBLite consensus disorder prediction 315 347 - -
Seca4g09966 435 FunFam Protein EMSY-LIKE 3 243 295 - -
Seca4g09966 435 SMART ENT_2 53 126 IPR005491 -
Seca4g09966 435 MobiDBLite consensus disorder prediction 417 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09966 Seca-Chr4 232652596 232661516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09966 - - gmx:100791651 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09966 4 232652596 232661516 Seca4g09966 4 232652596 232661516 ECH