Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09952 ATGTTGGGAATTTATGGAGATGCTGGAATAGGCAAACCCACATTTGGCTCGTATTTGTATAACAAGATCAGGGATCGATTTGAAGCTGGCAGTTTTCTTGCTAATGTCAAAGAAGATCTCCAAATGACACTTGTATATGAAACTGTTAAGGAGGTGATGATGGGCACTACATTTGAAGAACGGTCTCGAATAATAAAACATAAGCTTAGCCATAAAAAAGTTCTTTTGATTTTGGATGATGTTGATACGATAGAACAATTGGAAGCACTAGCTGGAGAATGTGACTGGTTTGGTTCTGGTAGCTTGATCATTATAACAACAAGGGATGAAACCGTGCTAGATAAGCATGATGTTGCAATTAAGAAATATAAAATGGAGGAGCTAAGTTTTGGTGACTCGCTACAACTCTTTTGTTGGTATGCCTTTAATATGAGCGAACCTGTAGAAACCTTTTCAGATATTTCTACAGAAGTAGTGAGTTCTGCAAAAGGTTTTCCACGGGCTTTAAAAGTACTGGGCTCCAATTTAAAGGGTCTAAGTGTAGAGGAATGGGAAATGGAATTGGAGAAATATAGGAAGGTTCCAGATACGTTTTATTTTTTGGTAGATTCTTTCTGA 618 0.3738 MLGIYGDAGIGKPTFGSYLYNKIRDRFEAGSFLANVKEDLQMTLVYETVKEVMMGTTFEERSRIIKHKLSHKKVLLILDDVDTIEQLEALAGECDWFGSGSLIIITTRDETVLDKHDVAIKKYKMEELSFGDSLQLFCWYAFNMSEPVETFSDISTEVVSSAKGFPRALKVLGSNLKGLSVEEWEMELEKYRKVPDTFYFLVDSF. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09952 205 Gene3D - 128 200 IPR042197 -
Seca4g09952 205 PRINTS Disease resistance protein signature 1 14 - -
Seca4g09952 205 PRINTS Disease resistance protein signature 162 176 - -
Seca4g09952 205 PRINTS Disease resistance protein signature 68 82 - -
Seca4g09952 205 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 194 IPR044974 GO:0006952
Seca4g09952 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 195 IPR027417 -
Seca4g09952 205 Gene3D - 1 122 IPR027417 -
Seca4g09952 205 Pfam NB-ARC domain 2 187 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09952 Seca-Chr4 232521407 232522057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09952 2 199 WRKY Transcription Factor Family AT5G45050 30.097 6.42e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09952 - - lja:Lj3g3v0465900.1 293.893