Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09944 ATGGTTCGCTCCCAAGGTGTTAGCCTCTTTAACCGCCTTGCTCGCCGATCACTCTTTCACGCCAATGATTCCGTATATCAAACAGTGTCCCAAAGGAGTTATAGGACATTGAACTCAGGGCCTTGCAATCCATGTGGAGTTATTGGAAGTTATGCATCAAATGTTGGAGATGGCATTAATTTGAAGAATTGGTTGCTATTGGGAGCGGCTAATCCATACTGGGGAGCATCTAGATCAATTCATGGCACGGCATCATTGGCAAGGGACTATTATGATGTTCTTGGTGTGAGTAAGAATGCAAGTTCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAGAAGCTCCATCCAGACACAAATAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCAATGGCATATGAGGTTTTGAAGGATGAGGAAAGACGTCAACAGTATGATCAGGTTTAA 462 0.4221 MVRSQGVSLFNRLARRSLFHANDSVYQTVSQRSYRTLNSGPCNPCGVIGSYASNVGDGINLKNWLLLGAANPYWGASRSIHGTASLARDYYDVLGVSKNASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSMAYEVLKDEERRQQYDQV. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09944 153 SMART dnaj_3 88 146 IPR001623 -
Seca4g09944 153 Pfam DnaJ domain 89 151 IPR001623 -
Seca4g09944 153 PRINTS DnaJ domain signature 126 146 IPR001623 -
Seca4g09944 153 PRINTS DnaJ domain signature 91 109 IPR001623 -
Seca4g09944 153 PRINTS DnaJ domain signature 146 153 IPR001623 -
Seca4g09944 153 PRINTS DnaJ domain signature 109 124 IPR001623 -
Seca4g09944 153 ProSiteProfiles dnaJ domain profile. 89 153 IPR001623 -
Seca4g09944 153 Gene3D DnaJ domain 76 153 IPR036869 -
Seca4g09944 153 SUPERFAMILY Chaperone J-domain 88 152 IPR036869 -
Seca4g09944 153 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Seca4g09944 153 CDD DnaJ 89 143 IPR001623 -
Seca4g09944 153 PANTHER DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL 41 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09944 Seca-Chr4 232364261 232366554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09944 85 151 C2H2 Transcription Factor Family AT1G74250 43.056 1.26e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09944 K03686 - gmx:100799735 272.707