Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09937 ATGATAGAGATAGAAACTCTGTTGCTGCTCCTCTCACCCTTCCTTCTATTTTACATCATCTTCTCCGTCAAACCCGCCACCACCACCGTTCTCCGCCTTCCACCAAGTCCACCATCTCTCCCATTAATCGGCCACCTCCACCTCCTCACTCCATCCTTATACAAATCCTTCCAATCCCTCTCCTCAAATCACGGCCCTCTCCTCCACCTCCGTCTCGGCCCCTCCCGCCGCCTCCTCCTCGTCTCCTCGGCCTCCGCCGCTGCCGACATCTTCAAGACTCACGACCTCGCCTTCTCTTCCCGACCGGCATTCGCGTTCGCCGAGAGACTCCCTTACGGCACCTCAGGATTCATCACCGCTCCCTATGGCCCCTACTGGCGCTTCATGAAGAAGCTCTGCGTTACGGAGCTTCTCAGCCCGAGGCAGGTGGAGAGGTCAAAGAGCATAAGGAAGGAAGAGATAGAGCGTTGCGTGAGAAAGGTATTGGAGAATGCTCGGAAGAATGGTGCACTTGATTTGGGTGCTGAACTCATGAAACTCACCAACAATGTCACTTGCAGAATGGCCATGAGCACCAGCGCTGGAATTGGTTGGAATTGTTTGGATGGAACTAGAGGTTGGGAAAATCATCTGAATTCTGCTCTAAAGGGTATCTCTGAGTTTTCAGGGGTCAAATTTCTGTATGAAAAGCAATTCACTTTGTTTCTCTTACTACTTGTGTCTCAGTTTCCTCTGACTCTACCGTATTTTGGAACAAGGTGTTCGGAGAAATGCGAGGATGCTGAGAGGATCAGGAATTTGGTGAAGGAGTCCTTTGAGCTTGCTGCCAAATTGTGCTTTGGGGATGTGTTGGGCCCTCTCAAGGAGTTGACTTTCTGGGTTTATGGGAAAAAGGCTAGGGATGTGAGCAACAGGTATGATGAATTGTTGGAGAAGGTGCTGAAGGAGCATGAGGAGAAAAGGTTATCAGGTGGAAATGGGAATGGAGGTGATGAGAGTGAGAGGGATTTAATGGATATTCTGTTGGATGTTTATCATGATGCTTATGCAGAGTTCAAGATCACAAGGACACATATCAAAGCATTCTTTATGGACCTCTTCATTGCAGGCACAGACACCTCAGCAGAAGCTATGCAATGGGCAATGGCTGAGCTCCTCAACCATCCTGAAGCATTCCAGAAGGTGAGAAAGGAGATAGAGTTAGTCACTCAAAATGTTAGGCTAGTTGAAGAATCAGATGTCCAAAACCTGCCATATTTGCAAGCAGTTGTGAAGGAAACACTGAGACTTTACCCACCAGGACCAGTAACAACAAGAGAATGCCGCCAAGACTGCAAAATAAATGGCTTTGATGTACCAGCAAAAACAGCAGTAGCAATCAATTTATACGCCATAATGAGGGACCCAGATTCTTGGGATAATCCAAATGAATTTCGCCCTGAAAGGTTCTTGGTCTCCTTGAATCAACAAGATGATCCAATTCCAAGCAATGATCAGAATGGTGCTAAAAGAATGAACTTCAATTTTGTTCCATTTGGAGCTGGAAGAAGAGGGTGCCCAGGGACAACACTGGCATTCAACTTGATGAACACTGCAATTGCTGCTATGGTGCAGTGCTTTGATTGGAAAATTGGTGAAGATGGGAAAGGAGAAAAGGTTGATATGCAATCTGGATCTGGCATGTCTTTGAGCATGGTTCATCCACTTATTTGTCTTCCTGTAGTGCATTTTAACCCATATGATGAATAA 1749 0.4677 MIEIETLLLLLSPFLLFYIIFSVKPATTTVLRLPPSPPSLPLIGHLHLLTPSLYKSFQSLSSNHGPLLHLRLGPSRRLLLVSSASAAADIFKTHDLAFSSRPAFAFAERLPYGTSGFITAPYGPYWRFMKKLCVTELLSPRQVERSKSIRKEEIERCVRKVLENARKNGALDLGAELMKLTNNVTCRMAMSTSAGIGWNCLDGTRGWENHLNSALKGISEFSGVKFLYEKQFTLFLLLLVSQFPLTLPYFGTRCSEKCEDAERIRNLVKESFELAAKLCFGDVLGPLKELTFWVYGKKARDVSNRYDELLEKVLKEHEEKRLSGGNGNGGDESERDLMDILLDVYHDAYAEFKITRTHIKAFFMDLFIAGTDTSAEAMQWAMAELLNHPEAFQKVRKEIELVTQNVRLVEESDVQNLPYLQAVVKETLRLYPPGPVTTRECRQDCKINGFDVPAKTAVAINLYAIMRDPDSWDNPNEFRPERFLVSLNQQDDPIPSNDQNGAKRMNFNFVPFGAGRRGCPGTTLAFNLMNTAIAAMVQCFDWKIGEDGKGEKVDMQSGSGMSLSMVHPLICLPVVHFNPYDE. 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09937 582 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
Seca4g09937 582 Gene3D Cytochrome P450 26 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 Gene3D Cytochrome P450 247 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 568 - -
Seca4g09937 582 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS P450 superfamily signature 369 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 CDD CYP93 65 573 - -
Seca4g09937 582 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS E-class P450 group I signature 421 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS E-class P450 group I signature 358 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 PRINTS E-class P450 group I signature 378 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 FunFam Cytochrome P450 family protein 244 571 - -
Seca4g09937 582 SUPERFAMILY Cytochrome P450 34 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 Pfam Cytochrome P450 34 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09937 582 Pfam Cytochrome P450 250 558 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09937 Seca-Chr4 232271127 232275034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09937 42 577 Cytochrome P450 AT3G20100 43.438 5.77e-144 424