Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09930 ATGCAATTTTCTTTCATTTTAATGTTGCTAGTCTTTGCTTTTGATGGTAGTGAATCCCAGAATTGTGGCTACCCACTCAAGACCATTACCGTTAGTCAATCAGGCAATGCAGATTTCAAAACAATTAAAAGTGCCCTTGACTCTGTCCCTAAGAAAAACCCTCATTATTGGATTCACATCCAAATTTTACCGGGTGTTTACAGGGAGCATATCGATATTCCGGTGAATAGACCATGCATTTATCTTGAAGGAGCTGGTAGAGACTCCACAAGTATCGAATGGAGTGATCATTCGGTTGCTACTTTTTTTACGAGGGCAAGTAATATTGTTGCAAAGGGCATTACTTTCATGAATACACTCAACAACCCTGTAACATTAAATGAAAATGAAAGTAGCAACATCACCCAAGCCTTGGCTGCACGGATCCATGGAGATAAATGTGCTTTCTTCGATTGTGCTTTTTTAGGGGTGCAAGATACCCTATGTGATGATTATGGCCGCCATTACTATCATAATTGCTACATTCAAGGTGGAGTTGATTTCATTTATGGGAATGGTCAATCAATCTTTGAGGCAAGTACAATATATTTTTCAATGGGGAATTCTGGTTCCAAAATTGATGGGTTTATTACAGCACAAGAAAGGGAATCACCAGATAAAAACACTGGGTTTGTGATTAAAAATTGTATCATAAACGGAACAGGGGGAAAGGCAGAACTTGGGAGAGCTTTGACTGCTTATTCCAGAGTCATCATAGCCAATTCATTCCTAACAGATGTGGTTAAACCTGAGGGATGGAGTCAAACGAAATATGTTGGGCATGAAGCAAACATCACATATGTGGAAGAGGGATGCAGAGGACCAGGAGCAAACAAATCAAAGCGTGTGAAATGGATGAAGAGTTTGAGTGGACCAGAGCTTCAAAAATTCTTGGATATCTCTTATATTGATAGTGAAGGGTGGATTGACAAACTCCCAACAAAAAGATCATTTGAATGA 999 0.3924 MQFSFILMLLVFAFDGSESQNCGYPLKTITVSQSGNADFKTIKSALDSVPKKNPHYWIHIQILPGVYREHIDIPVNRPCIYLEGAGRDSTSIEWSDHSVATFFTRASNIVAKGITFMNTLNNPVTLNENESSNITQALAARIHGDKCAFFDCAFLGVQDTLCDDYGRHYYHNCYIQGGVDFIYGNGQSIFEASTIYFSMGNSGSKIDGFITAQERESPDKNTGFVIKNCIINGTGGKAELGRALTAYSRVIIANSFLTDVVKPEGWSQTKYVGHEANITYVEEGCRGPGANKSKRVKWMKSLSGPELQKFLDISYIDSEGWIDKLPTKRSFE. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09930 332 Gene3D - 26 331 IPR012334 -
Seca4g09930 332 Pfam Pectinesterase 29 315 IPR000070 GO:0030599|GO:0042545
Seca4g09930 332 FunFam Pectinesterase 25 326 - -
Seca4g09930 332 SUPERFAMILY Pectin lyase-like 27 329 IPR011050 -
Seca4g09930 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09930 Seca-Chr4 232226431 232228638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09930 25 322 Carbohydrate Esterase AT1G05310 39.937 5.01e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09930 - - cam:101494460 460.685