Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09929 ATGCAATACACACAGCTCTTTTCTTTCATTTTAATGTTGCTAGTCCTTGCTTTTGATGGTAGTGAATCCCAGCAGAATTGTGGCTACCCACTCAAGACCATTACCGTTAGTCAATCAGACAATGGAGATTTCAAAACAATTCAAAGTGCCATTGACTCTGTCCCTAACAAAAACTCTCAATGGATTCACATCCAAATTTCACCTGGTGCTTACAGAGAGCAAATCAGAATTCCCATGAATAAATCATGCATTTATCTTGAAGGAGCTGGTACAGACTCAACGAGTATTGAATGGGGTGATCATTTGAAGCCTACTTTTCTAATTACAAGAGCAGATAATATTGTTGCAAAGGGCATTACTTTCATGAATACACTTAACAACCTTGTACTATTAGAGGGCACTAGTAACATCACACAAGCCTTGGCTGCATGGATCCATGGAGATAAATGTGCTTTCTTTAATTGTGCTTTTCTAGGGGTGCAAGACACCCTACGTGATCATTATGGCCGCCATTACTATCATAATTGCTACATTCAAGGTGGGGTTGATTTCATTTATGGGAACGGTCAGTCAATCTTTGAGGCAAGTACAATATATTTTTCAATGGGGAAATCTGGTCCCAAAAAGGATGGGGCTATTACAGCACAAAAAAGGGATTCACCAAATGAAAGCAGTGGGTTTGTGTTTAAAAATTGTATCATAAACGGGACAGGTGGAAAGGCAGAACTTGGGAGAGCATTGGGTGCTTATTCCAGAGTCATCATAGCCAATTCATTCCTAACAGATGTGGTTAAACCTGAGGGATGGAGTCCTTGGACATATGTTTGCCATGAAGCAAACATCACATATGTGGAAGAGGGATGCAGAGGGCCAGGGGCAAACAAATCAAAGCGCGTGAAATGGATGAAGGATTTGCGTGAACCTGCACTTAATAAATTCTTGGATATCTCTTATATTGATAGTGAAGGGTGGATTGCCAAACTGCCAACAAAAAGATCATTTGAATGA 1008 0.4018 MQYTQLFSFILMLLVLAFDGSESQQNCGYPLKTITVSQSDNGDFKTIQSAIDSVPNKNSQWIHIQISPGAYREQIRIPMNKSCIYLEGAGTDSTSIEWGDHLKPTFLITRADNIVAKGITFMNTLNNLVLLEGTSNITQALAAWIHGDKCAFFNCAFLGVQDTLRDHYGRHYYHNCYIQGGVDFIYGNGQSIFEASTIYFSMGKSGPKKDGAITAQKRDSPNESSGFVFKNCIINGTGGKAELGRALGAYSRVIIANSFLTDVVKPEGWSPWTYVCHEANITYVEEGCRGPGANKSKRVKWMKDLREPALNKFLDISYIDSEGWIAKLPTKRSFE. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09929 335 Gene3D - 30 333 IPR012334 -
Seca4g09929 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 326 - -
Seca4g09929 335 FunFam Pectinesterase 30 329 - -
Seca4g09929 335 SUPERFAMILY Pectin lyase-like 32 330 IPR011050 -
Seca4g09929 335 Pfam Pectinesterase 34 303 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09929 Seca-Chr4 232206839 232208378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09929 7 272 Carbohydrate Esterase AT2G19150 45.018 1.74e-69 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09929 - - mtr:25501033 466.848