Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09922 ATGGCTCACGAGATTAAAAAAGAAGAAACCGAATTCAAGGTTCCCGAAACCATCAACCCATGCAGCAACCCTGCTGCCACCACCACCACCCCGACAACCTCCACAATCACAGAACCTTCCAGATTTTTTGACGATAAGGCCACCGCCAGATCCGCCACGTCATCACGCTCCCCCAAGAGATCTCACCCTCCAGACGACGAACAAGAAGGCCTCGCTCAAACGACGCCGTCCGAGGCCAAACGCGCCGTCAACCGCTGCTCCGGCTGTCGGAAGAGGGTTGGTCTCACCGGATTTCGGTGCCGCTGCGGCGACCTATTCTGCGCCGAGCACCGCTACTCTGACCGCCACGACTGCACCTATGATTACAAATCCGCCGGACGAGAGGCCATCGCCAGGGAAAATCCGGTCGTCAAAGCCGCGAAGATCGTCAAATTCTAA 438 0.5708 MAHEIKKEETEFKVPETINPCSNPAATTTTPTTSTITEPSRFFDDKATARSATSSRSPKRSHPPDDEQEGLAQTTPSEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCAEHRYSDRHDCTYDYKSAGREAIARENPVVKAAKIVKF. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09922 145 Pfam AN1-like Zinc finger 86 123 IPR000058 GO:0008270
Seca4g09922 145 Gene3D - 49 141 IPR035896 -
Seca4g09922 145 SMART AN1_Zf_4 86 123 IPR000058 GO:0008270
Seca4g09922 145 ProSiteProfiles Zinc finger AN1-type profile. 80 126 IPR000058 GO:0008270
Seca4g09922 145 MobiDBLite consensus disorder prediction 1 77 - -
Seca4g09922 145 FunFam Zinc finger AN1-type containing 6 56 141 - -
Seca4g09922 145 PANTHER AN1-TYPE ZINC FINGER PROTEIN 15 144 - -
Seca4g09922 145 MobiDBLite consensus disorder prediction 16 58 - -
Seca4g09922 145 SUPERFAMILY AN1-like Zinc finger 72 139 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09922 Seca-Chr4 232134433 232134870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09922 74 145 C2H2 Transcription Factor Family AT3G52800 61.111 2.87e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09922 - - lja:Lj3g3v0478150.1 214.157