LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g09909	ATGGAAGAAAGCAGAGGAAGAGTGTGTGTTACTGGAGGTACAGGGTTTATTGGTTCATGGATAATCAAGAGGCTCCTTGAAGATGGTTATTGTGTCAATACCACCATGAGACCTGACCCAGTAGAACACAAGAAAGACCTTAGCTTTCTTACCAACTTACCTGGAGCATCCCAAAGGCTACAAATTCTCATTGCAGATCTCAGCAATCCAGAAAGTTTCAGTGCAGCCATTGAAGGGTGCATTGGTGTTTTCCATGTTGCTACCCCAATTGATTTTGAATTAAGAGAACCTGAGGAAGTAGTGACCAAAAGATCCATTGATGGTGCACTAGGCATTTTGAAGGCCAGTCTCAATTCCAAGACTGTGAAGAGAGTTGTTTACACTTCTAGTGCCTCTGCTGTGGTTTCCAATGGTAAAGAAGATGAAGTGAAGGATGAAAGTTTTTGGAGCGATGTGGATTATCTTAGAGCTTCAAAGCCATTTGGTTGGTCTTATGCAGTTTGTAAGACATTGACAGAAAAGGCAGTGCTTGAATTTGGAGAACAGAATGGATTGGATGTTGTGACAATAGTTCCTACTTTTGTTCTTGGACCCTTTATTTGTCCAAAGCTTCCTAGCTCTGTTCGTGCTTCATTGGATTTCGCATTTGGTATGTGA	657	0.417	MEESRGRVCVTGGTGFIGSWIIKRLLEDGYCVNTTMRPDPVEHKKDLSFLTNLPGASQRLQILIADLSNPESFSAAIEGCIGVFHVATPIDFELREPEEVVTKRSIDGALGILKASLNSKTVKRVVYTSSASAVVSNGKEDEVKDESFWSDVDYLRASKPFGWSYAVCKTLTEKAVLEFGEQNGLDVVTIVPTFVLGPFICPKLPSSVRASLDFAFGM.	219

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g09909	218	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	5	206	IPR036291	-
	Seca4g09909	218	Gene3D	-	5	218	-	-
	Seca4g09909	218	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	6	205	-	-
	Seca4g09909	218	FunFam	Dihydroflavonol reductase	5	218	-	-
	Seca4g09909	218	Pfam	NAD dependent epimerase/dehydratase family	8	199	IPR001509	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g09909	Seca-Chr4	231868922	231870252	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca4g09909	8	217	Miscellaneous Gene Families	AT5G19440	41.315	4.89e-46	153

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g09909	-		K13265	gmx:100796029	367.466

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca4g09909	4	231868922	231870252	Seca4g09909	4	231868922	231870252	ECH