Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09908 ATGGTGCATGTGGATGATGTAGCTAGGGCGCATATATTTCTGCTTGAACATACTAATCCACATGGGAGGTATAATTGTTCACCATGTTTGGTAACTGTTGAAAAGATGTCTGAACTTGTGTCTACCAAATACCCAGAATTTCAACTGCCAACAGTGGACTTTTCCAAGCAAATTGAAGGTTTCAAGGCTCCAGATGTATCCTCAAAGAAGCTAATGGATGCAGGATTTTTGTTCAAGTATGGACTTGAGGAAATGGTTGATGATGCAATTCAGTGCTGCAAGAAAAAGGGTTACCTGCAAGGGGATTGTTCCCCCTTTGTTGTATTATAG 330 0.4061 MVHVDDVARAHIFLLEHTNPHGRYNCSPCLVTVEKMSELVSTKYPEFQLPTVDFSKQIEGFKAPDVSSKKLMDAGFLFKYGLEEMVDDAIQCCKKKGYLQGDCSPFVVL. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09908 109 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 99 IPR036291 -
Seca4g09908 109 Gene3D - 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09908 Seca-Chr4 231867771 231868546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09908 1 99 Monolignol Biosynthesis Gene Families AT2G02400 31.313 3.99e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09908 - K13265 gmx:100796029 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09908 4 231867771 231868546 Seca4g09908 4 231867771 231868546 ECH