Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09903 ATGAATGATGGTAGACAAATGGGGGTGCATTACATGGATGCTGGCTTTCCTTATGCTGTTAATGAAAACTACGTGGATTTCTTTCATGTGCCGGTGAATTATGCCTTTGCTGGCTCAATGCCTGATCAGGAAAGTGTGTACTGGTCAATGAACATGAATCCCTATAAGTTTGGAGTATCTGGCCCTGGGAGTACATCTTATTACAGTTCTTATGAGGTAAATGATCATTTGCCAAGAATGGAGATCAACAGGACCGATTGGGAATACCCTTCAGTAATGACCACTGAGGAACCTGCCACAACAGATTCTCCACCTAGAAGAGATGGAGCCACTAGCATGCAGACTATCCCTGAAGAATGCAGTCCAAATCATCATGAGTCCAGTAGTAGCCAGGATCACTGGGTCCCCTATGCTTGA 417 0.446 MNDGRQMGVHYMDAGFPYAVNENYVDFFHVPVNYAFAGSMPDQESVYWSMNMNPYKFGVSGPGSTSYYSSYEVNDHLPRMEINRTDWEYPSVMTTEEPATTDSPPRRDGATSMQTIPEECSPNHHESSSSQDHWVPYA. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09903 138 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 132 IPR033276 GO:0004842|GO:0016567|GO:0046621
Seca4g09903 138 MobiDBLite consensus disorder prediction 88 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09903 Seca-Chr4 231783179 231786777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09903 9 134 C3H Transcription Factor Family AT3G63530 42.748 8.21e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09903 K19045 - gmx:100792734 243.817