Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09892 ATGAACTTTGCCCAAGTACTCGGCCATGGATCCATCAAGACGTCTAGGGACAATGGTACTCAAGAGATTGTGGCAAACACCATAGAGGCGTTGGGTATCATTGGTGTAAAGCACCCTTGCCTGCTCCCAAACCCCAACACATGTCTCATGGGCGCGAAATATCTGCTTCAGGCCAATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACGTGCCGCCTTGAGAATCCAAATTTGGACATGGTCGGCGGGGCTGTCAAGGAAAAGCTTGAAAATTTCTCAAATGAGCTGTATGAAATGAGATTCAACATGAAAACTGGTGAAGCTTCTCAAAAGAAACTATCAGCATCTGCTGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGAAACAGCGATATGTATATGGAACCACATTAGACAGCATTGCAAAAGTTACTGGGATTATTAAATTTGATTTGCATGCCAAACCGGATTCTGAAAAAACAAAGCTTGAAATTGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTATGGCTCTGAGGCTATTTATGTCCCACGTGTCCCTGGTACCGATTCTGAAGAAGATGATGGATACTTGATCTGTTTTGTACATGATGAGAATACCGGAAAATCGTTTGTGCATGTCATCGATGCAAAAACAATGTCAGCAGATCCTGTTGCAGTTGTAGAATTGCCACATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACAGAGGACCAACTGCAAGAACAGGCAAGACTGTAA 786 0.4389 MNFAQVLGHGSIKTSRDNGTQEIVANTIEALGIIGVKHPCLLPNPNTCLMGAKYLLQANAWEEEDEVVLITCRLENPNLDMVGGAVKEKLENFSNELYEMRFNMKTGEASQKKLSASAVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAKPDSEKTKLEIGGNVQGLYDLGPGKYGSEAIYVPRVPGTDSEEDDGYLICFVHDENTGKSFVHVIDAKTMSADPVAVVELPHRVPYGFHAFFVTEDQLQEQARL. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09892 261 PANTHER BETA-CAROTENE DIOXYGENASE 58 251 IPR004294 GO:0016702
Seca4g09892 261 Pfam Retinal pigment epithelial membrane protein 57 250 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09892 Seca-Chr4 231619971 231623400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09892 K00465 - gmx:100789210 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09892 4 231619971 231623400 Seca4g09892 4 231619971 231623400 ECH