Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09879 ATGCCACCTAATTTAATTTCTCTTAAGGTATATATGGCATCCACCCTTGATCACCACCAACTGAACCGCTTCTCTGATGTCGGAAACAAGGTTGCCGATGCCGCCGGACAAGTTATTCGCAAATATTTCAGGAACAAGTTCGATATTCTTCACAAAGATGATCTCAGCCCAGTAACAATTGCGGATCAATCAGCTGAGGAGTTTATGGTTTCAATCATATCAGAGAATTTCCCTTCTCATGCAATTTATGGAGAGGAATATGGGTGGAGGTGTAAAGAAAAGAGTGCAGAATATGTTTGGGTTTTAGATCCTATAGATGGGACAAAGAGCTTTATCACCGGGAAACCCTTATTTGGTACACTCATTGCTCTTCTACAAAATGGTAGACCGATCCTTGGCATAATTGATCAACCAGTTTTGAGAGAAAGATGGATTGGAGTTGCTGGAAAGAGAACTACATTGAATGGACAAGAAGTGTCCACACGCATTTGTACAAACCTTTCTCAAGCCTACTTGTACACCACAAGCCCACATCTGTTCAGTGGAGATGCAGAAGAGGCATTCTTCCGTGTCAGAAGCAAGGTTAAGACTCCATTGTATGGTTGTGACTGCTATGCTTATGCTCTTTTGGCTTCTGGTTTTGTGGATCTTGTTGTTGAGTCTGGTCTGAAGCCATACGACTTTCTAGCATTGATCCCTGTTATTGAAGGAGCTGGAGGTGTCATAACTGATTGGAAAGGACTTCAACTCACTTGGGAAGCTTCTCCACTTTCACCTGCAAAAATTTCAGCTGGCCCTGCTTCTAACTTCATTCCTAAAGATAACTTCCTCATTGATTGTGGTGCTGAAAATGTAGCCACCCTCCCTGATGGAAGACAATTCAAATCAGACCCACAAGCCAATTCTTTCTTGCAAGCCAATGATGATTATAAAGTCTCAGCTAATGATGTGGATGTTCCTTCTCCTATTTACTCAAATGCAAGGATATTCATTCAGGAAGCTAAGTACTCCTTCCATTTGGTTCAACCAGGATTTCATTGGGTTCGCCTTCATTTCTTCCCTATTAAAAACAATGTTTTTGATCTTCAGAAGGCTACTTTCTCTGTCAACACAGATAAATTTGTCCTTCTCCACAGCTTCAATGTTAACAACACTGAAAAGGCAATCCTCAAGGAGTACCTCATCAATGCAACTGAACCCCATTTCACCTTATCCTTCATTCCCTTGAAAAACTCAGCTGCATTCATCAATGCCATTGAACTTGTTTCAGCTCCTGATAACCTGATCTTTGACAGTGGTGCCAGCCTTTTCCCTGTTGGGGAGTTTTCTGGCCTTACAGCTTTTGGTTTCCAACCTGTTTATAGGCTCAACAATGGAGGACCTATGATCACCCCATCAAATGACACCTTGGCAAGAACTTGGGAATCTGATGAGCCTTACCTCACAAACAAGAACTTGGCAAAAGGTGTCTCAGTGGCTACCACTGCCATTAAGTTCCCTCAAGACACACCAACAATTTCTCCTCTTATTGCACCACAAACGGTGTATGCTTCTGCCACTGAAATGGGTGATGCTGGTGTTAATCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTGGACACTTCTTTTAGTTACCTCATTAGATTGCATTTCTGTGACATTGTAAGCAAAGGGCTTAATGAACTCTACTTCAATGTCTATGTTAATGGGAAAATGGCAATTTCTAACTTGGATTTGTCAGCTATTACTGGTGCCTTGTCAACCCCATATTACAAAGACATTGTAGTCAATGCAACATTGATGTCTCAAGGACTAACAGTTCAGGTTGGTCCAGCAAATGCTGATGGTGGAAATGCCAATGCCATTATGAATGGTATAGAGGTCTTGAAGATAAGCAACTCTGTGGATAGTTTGGATGGAGAATTTGGGGTTGATGGAAGAAGAATTGGTGGTTCTAACCGTGGGACAGTGGCAGCAGTTGGATTTGCCATGATGTTTGGAGCCTTTGTGGGACTTGGTGCTATGGTGATCAAGTGGCACAAGAGGCCTCAAGATTGGCAAAAGAGGAATAGCTTCTCTTCATGGTTACTTCCTTTACATGCTGGTGATACAAGCTTCATGAGCAGCAAAACCTCAATGGGAAAGAGCAACATCTACTCCTCATCAATGGGATTAGGCAGGTTTTTCTCCTTTTCAGAATTACAAGAAGCAACCAAGAACTTTGATTCCAAGAACATTATTGGTGTTGGTGGATTTGGTAATGTCTATTTGGGTGTGATTGATGAGGGGACTCAAGTGGCAGTCAAGAGAGGAAATCCACAATCAGAACAAGGAATCAATGAATTCCAAACTGAAATTCAAATGTTATCCAAGCTTAGACACAGGCATTTAGTGTCTTTGATTGGATACTGTGATGAGAATGATGAGATGATCCTTGTTTATGAGTACATGCCTAATGGACATTTCAGAGACCATCTTTATGGAAAGAACTTGCCATCACTTTCTTGGAAGCAAAGGTTAGAGATTTGCATTGGATCAGCTCGTGGTCTTCACTACCTTCACACAGGAACTACACAAGGTATCATCCACCGTGATGTTAAGACCACAAACATCTTACTTGATGAGAATTTCACAGCCAAAGTTTCTGACTTTGGACTTTCAAAGGATGCACCTATGGGCCAGGGTCATGTTAGTACAGCAGTGAAAGGTAGTTTTGGTTATCTTGACCCTGAGTACTTCAGGAGACAACAATTGACAGAAAAATCAGATGTATACTCATTTGGGGTGGTCCTTCTTGAAGCACTATGTGCAAGGCCAGCTATTAACCCTCAATTGCCTAGAGAACAAGTAAACTTGGCTGATTGGGCAATGCAATGGAAGAGAAAAGGGTTGCTTGACAAGATCATTGATCCTCTTCTTGTTGGTTCAATCAACCCTGAATCTATGAAGAAATTTGCTGAGGCTGCTGAGAAATGTTTGGCTGATCATGGTGTTGATAGGCCTTCAATGGGAGATGTACTTTGGAACTTGGAATATGCATTGCAGCTTCAAGAAGCATTCACACAAGGTAAGGCAGAGGATGAGATTAAGTCAACTGCAGCTGTTCCTACTTCACCTGCTCCAGTTCCAACACCTTCCTCTACCTCTGATGACACCCCAGTTTCACGTCCAGAAGTGAATAATAATAATAATAGTCCACCAGAAGTGCATGCTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTTAATAATCTTAATGGCAGGTGA 3276 0.4176 MPPNLISLKVYMASTLDHHQLNRFSDVGNKVADAAGQVIRKYFRNKFDILHKDDLSPVTIADQSAEEFMVSIISENFPSHAIYGEEYGWRCKEKSAEYVWVLDPIDGTKSFITGKPLFGTLIALLQNGRPILGIIDQPVLRERWIGVAGKRTTLNGQEVSTRICTNLSQAYLYTTSPHLFSGDAEEAFFRVRSKVKTPLYGCDCYAYALLASGFVDLVVESGLKPYDFLALIPVIEGAGGVITDWKGLQLTWEASPLSPAKISAGPASNFIPKDNFLIDCGAENVATLPDGRQFKSDPQANSFLQANDDYKVSANDVDVPSPIYSNARIFIQEAKYSFHLVQPGFHWVRLHFFPIKNNVFDLQKATFSVNTDKFVLLHSFNVNNTEKAILKEYLINATEPHFTLSFIPLKNSAAFINAIELVSAPDNLIFDSGASLFPVGEFSGLTAFGFQPVYRLNNGGPMITPSNDTLARTWESDEPYLTNKNLAKGVSVATTAIKFPQDTPTISPLIAPQTVYASATEMGDAGVNQPNFNVSWKFDVDTSFSYLIRLHFCDIVSKGLNELYFNVYVNGKMAISNLDLSAITGALSTPYYKDIVVNATLMSQGLTVQVGPANADGGNANAIMNGIEVLKISNSVDSLDGEFGVDGRRIGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKTSMGKSNIYSSSMGLGRFFSFSELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGKNLPSLSWKQRLEICIGSARGLHYLHTGTTQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDEIKSTAAVPTSPAPVPTPSSTSDDTPVSRPEVNNNNNSPPEVHAIDDHSGTAMFAQFNNLNGR. 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09879 1091 Gene3D - 160 268 - -
Seca4g09879 1091 Pfam Protein tyrosine and serine/threonine kinase 745 939 IPR001245 GO:0004672|GO:0006468
Seca4g09879 1091 MobiDBLite consensus disorder prediction 1026 1078 - -
Seca4g09879 1091 NCBIfam histidinol-phosphatase 27 251 IPR011809 GO:0004401
Seca4g09879 1091 CDD Bacterial_IMPase_like_1 24 254 - -
Seca4g09879 1091 FunFam Receptor-like protein kinase FERONIA 818 1031 - -
Seca4g09879 1091 Pfam Inositol monophosphatase family 29 253 IPR000760 -
Seca4g09879 1091 PRINTS Inositol monophosphatase superfamily signature 149 172 IPR000760 -
Seca4g09879 1091 PRINTS Inositol monophosphatase superfamily signature 78 94 IPR000760 -
Seca4g09879 1091 PRINTS Inositol monophosphatase superfamily signature 100 116 IPR000760 -
Seca4g09879 1091 PRINTS Inositol monophosphatase superfamily signature 56 76 IPR000760 -
Seca4g09879 1091 PRINTS Inositol monophosphatase superfamily signature 223 247 IPR000760 -
Seca4g09879 1091 PANTHER OS07G0166700 PROTEIN 728 1018 IPR045272 GO:0004714|GO:0006468
Seca4g09879 1091 SUPERFAMILY Protein kinase-like (PK-like) 725 1009 IPR011009 -
Seca4g09879 1091 ProSitePatterns Inositol monophosphatase family signature 1. 100 113 IPR020583 -
Seca4g09879 1091 Gene3D - 451 634 - -
Seca4g09879 1091 Gene3D - 275 425 - -
Seca4g09879 1091 Pfam Malectin-like domain 278 631 IPR024788 -
Seca4g09879 1091 ProSiteProfiles Protein kinase domain profile. 742 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g09879 1091 FunFam Receptor-like protein kinase FERONIA 449 634 - -
Seca4g09879 1091 Gene3D Transferase(Phosphotransferase) domain 1 818 1036 - -
Seca4g09879 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Seca4g09879 1091 MobiDBLite consensus disorder prediction 1045 1070 - -
Seca4g09879 1091 CDD STKc_IRAK 748 1012 - -
Seca4g09879 1091 FunFam Putative receptor-like protein kinase 275 425 - -
Seca4g09879 1091 FunFam Inositol monophosphatase 11 159 - -
Seca4g09879 1091 FunFam Inositol monophosphatase 160 270 - -
Seca4g09879 1091 ProSitePatterns Protein kinases ATP-binding region signature. 748 770 IPR017441 GO:0005524
Seca4g09879 1091 Gene3D - 9 159 - -
Seca4g09879 1091 FunFam receptor-like protein kinase FERONIA 705 817 - -
Seca4g09879 1091 Gene3D Phosphorylase Kinase; domain 1 705 817 - -
Seca4g09879 1091 SUPERFAMILY Carbohydrate phosphatase 27 255 - -
Seca4g09879 1091 SMART serkin_6 742 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09879 Seca-Chr4 231466389 231475518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09879 268 1091 Receptor kinase-like Gene Family AT4G39110 68.578 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca4g09879 Malectin_like 1.7e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09879 - - gmx:100790759 1474.53