Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09870 ATGATGTCCTGTTACTTTCATGATTCACTCTCACATTTAATATCCAATTTTCTTCTATGCTTTCCTCTTCAAATGTATGACATGGGTATTGTGCAGCTTTTAGTGGGCCTAGTAAGCTCCTACAGGCATGATAAAGTGGCTGTAAATTTGGAGGTTGCCAAGTCAGAGGCATCAAAACTACATGAAGCCATCAAAAGTAAGCAATTAGATGATGACCACATTGTTTGGATACTTAGCACCAGGAATTTTTTCCAGCTCCGGGAAACTTTTGCATGCTACAAGCAACTCTTTGGCAATACATTGGAGGAGGAAATAAGAAAATTTGGTAAAGGTGATTTGGAATCTCTCTTAAATTTGGTTGTATGGTGCATAGACTGCCCTGAGAAACATTTTGCAAAGGTTGTAAGAGATTCTATTGTTGGGCTTGGAACAGATGAAGATTCCCTCAACAGAGCTATTGTAACTCGAGCTGAAATTGATCTGTTGAAAGTCAGATTTGAATATGCTAACATGTACAAAAACAGTCTTGATGATGATGTGATTGGGGATACCTCAGGAAACTACAGAGATTTTTTGATGACTTTGCTAGGGAAAGGTCCAACTGGAGAATGA 612 0.3856 MMSCYFHDSLSHLISNFLLCFPLQMYDMGIVQLLVGLVSSYRHDKVAVNLEVAKSEASKLHEAIKSKQLDDDHIVWILSTRNFFQLRETFACYKQLFGNTLEEEIRKFGKGDLESLLNLVVWCIDCPEKHFAKVVRDSIVGLGTDEDSLNRAIVTRAEIDLLKVRFEYANMYKNSLDDDVIGDTSGNYRDFLMTLLGKGPTGE. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09870 203 FunFam Annexin 126 198 - -
Seca4g09870 203 SUPERFAMILY Annexin 32 197 IPR037104 GO:0005509|GO:0005544
Seca4g09870 203 PRINTS Annexin family signature 65 87 IPR001464 GO:0005509|GO:0005544
Seca4g09870 203 PRINTS Annexin family signature 135 156 IPR001464 GO:0005509|GO:0005544
Seca4g09870 203 FunFam Annexin 51 125 - -
Seca4g09870 203 Gene3D Annexin 127 198 IPR037104 GO:0005509|GO:0005544
Seca4g09870 203 SMART annex3 143 195 IPR018502 GO:0005509|GO:0005544
Seca4g09870 203 SMART annex3 70 120 IPR018502 GO:0005509|GO:0005544
Seca4g09870 203 Pfam Annexin 131 195 IPR018502 GO:0005509|GO:0005544
Seca4g09870 203 Pfam Annexin 57 117 IPR018502 GO:0005509|GO:0005544
Seca4g09870 203 ProSitePatterns Annexin repeat signature. 143 195 IPR018252 GO:0005509|GO:0005544
Seca4g09870 203 PANTHER ANNEXIN 31 195 - -
Seca4g09870 203 ProSiteProfiles Annexin repeat profile. 126 197 IPR018502 GO:0005509|GO:0005544
Seca4g09870 203 Gene3D Annexin 50 125 IPR037104 GO:0005509|GO:0005544
Seca4g09870 203 ProSiteProfiles Annexin repeat profile. 51 122 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09870 Seca-Chr4 231301091 231302746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09870 K17098 - gmx:100797149 299.286