Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09866 ATGGCTACCCTTATTGCTCCTGCTCAACATTCACCTGTTGCAGATGCAGAAGCTCTCCGAAAAGCTTTCCAAGGATGGGGTACTGATGAGAAGACAGTTATAGCAATATTGGGTCATAGAAATGTTCATCAGAGGCAGCAAATCAGAAAGGCTTATGAGGAACTTTACCAAGAGGATCTCATCAAACGCCTTGAGTCTGAGCTCAGTGGTGACTTTGAGAAAGCTGTGTACCGTTGGATGCTGGAACCTGCAGACCGTGATGCTGTTTTGGCCAATGTAGCCATCAAGGATGGCAGCAAAGGTTACCATGTGATTGTGGAAATTGTTTGTGTCCTTTCACCTCAAGAGGTCTTGGCAATGAGGAGTGCCTATCACAACCGTTACAAACGTTCCTTGGAAGAAGATGTAGCTGCTAATACCACTGGCCATCTTCGCCAAGTAAGTCATTCAGTGTTCGTTTGGTTTACAGTTTGGCAGCTGTTGGTTGGGTTGGTGAGCTCATTTAGGTATGATGGTGATGAGATCAATGCAAGATTGGCAAAAACTGAAGCTGATATTCTTCATGACTCTATCAAGGAGAAAAAAGGTAGCCATGAAGAAGCTATTAGGATCCTTACAACAAGGAGCAAGACTCAACTTCTTGCAACTTTCAACCGCTACAGAGATGACCATGGCACTTCAATAACAAAGAAATTGTTGGATGATGCATCTGATGACTTCCACAAGGCATTGCACACAGCTATTCGCTGCATCAATGACCATCAGAAGTACTATGAAAAGGTTCTGCGCAATGCAATCAAAAGGATTGGAACTGATGAGGATGCACTCACCCGTGTGGTGGTGTCAAGGGCTGAGAAGGACCTGAAGGACATCAAAGAGCTCTATTATAAGAGAAACAGTGTTCACCTTGAGGATGCAGTGGCCAAAGAAACTTCAGGGGACTACAAGAAGTTCCTCCTCACATTGTTGGGGAAGCAAGATTGA 984 0.4451 MATLIAPAQHSPVADAEALRKAFQGWGTDEKTVIAILGHRNVHQRQQIRKAYEELYQEDLIKRLESELSGDFEKAVYRWMLEPADRDAVLANVAIKDGSKGYHVIVEIVCVLSPQEVLAMRSAYHNRYKRSLEEDVAANTTGHLRQVSHSVFVWFTVWQLLVGLVSSFRYDGDEINARLAKTEADILHDSIKEKKGSHEEAIRILTTRSKTQLLATFNRYRDDHGTSITKKLLDDASDDFHKALHTAIRCINDHQKYYEKVLRNAIKRIGTDEDALTRVVVSRAEKDLKDIKELYYKRNSVHLEDAVAKETSGDYKKFLLTLLGKQD. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09866 327 FunFam Annexin 1 81 - -
Seca4g09866 327 SUPERFAMILY Annexin 3 325 IPR037104 GO:0005509|GO:0005544
Seca4g09866 327 PANTHER ANNEXIN 12 322 - -
Seca4g09866 327 ProSitePatterns Annexin repeat signature. 270 322 IPR018252 GO:0005509|GO:0005544
Seca4g09866 327 Gene3D Annexin 178 252 IPR037104 GO:0005509|GO:0005544
Seca4g09866 327 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Seca4g09866 327 FunFam Annexin 254 325 - -
Seca4g09866 327 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Seca4g09866 327 PRINTS Annexin family signature 310 323 IPR001464 GO:0005509|GO:0005544
Seca4g09866 327 PRINTS Annexin family signature 266 286 IPR001464 GO:0005509|GO:0005544
Seca4g09866 327 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Seca4g09866 327 Gene3D Annexin 255 325 IPR037104 GO:0005509|GO:0005544
Seca4g09866 327 ProSiteProfiles Annexin repeat profile. 253 324 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 FunFam Annexin 82 151 - -
Seca4g09866 327 ProSiteProfiles Annexin repeat profile. 178 249 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 FunFam Annexin 178 252 - -
Seca4g09866 327 Gene3D Annexin 82 151 IPR037104 GO:0005509|GO:0005544
Seca4g09866 327 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 SMART annex3 270 322 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 SMART annex3 196 247 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 Pfam Annexin 92 147 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 Pfam Annexin 260 322 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 Pfam Annexin 184 245 IPR018502 GO:0005509|GO:0005544
Seca4g09866 327 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09866 Seca-Chr4 231246371 231249221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09866 K17098 - gmx:100782110 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09866 4 231246371 231249221 Seca4g09866 4 231246371 231249221 ECH
Seca4g09866 4 231246371 231249221 Seca4g07338 4 164321132 164323333 PCT