Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09856 ATGATGTACAATGACCCTCACAACCCCCAACACCAGCACCAGTACCAGCAGCAGCCGCAGCATTTCCACCATCAGCAGCCAGGTCCGGAATTTCACCGTGGACCACCGCCTCCGCCACAGCCTCAGCCTCAGCCGCCGCCGATGATGCGTCAGCCTTCCGCTTCGTCCACGAACCTCGCCCCGGAGTTTCACCACCCCGGTCCCGGAGGCCCCCCTCCTCCTCATTACGATGTTCATAGTGAAAGCCATGGTGCAAAAAGAATAAGAAAGCTTACTCAGAGGAAGGCAGTTGATTATACGAGCACAGTTGTGCGTTATATGCAGATGTTGCCAGCAGTTGGCTATTCAGACAATCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCTATTAATCGTGTTCTTTGGACTCCAACAGGCCGGCGTCTTATTACTGGCTCACAGACAGGGGAATTCACTCTTTGGAATGGACAGTCTTTTAATTTTGAAATGATACTTCAGGCTCATGATCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCCGGTGATGATGGAGGCGCAATAAAGTAG 612 0.5016 MMYNDPHNPQHQHQYQQQPQHFHHQQPGPEFHRGPPPPPQPQPQPPPMMRQPSASSTNLAPEFHHPGPGGPPPPHYDVHSESHGAKRIRKLTQRKAVDYTSTVVRYMQMLPAVGYSDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIK. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09856 203 Pfam WD domain, G-beta repeat 172 199 IPR001680 GO:0005515
Seca4g09856 203 PANTHER WD40 REPEAT PROTEIN 106 203 IPR045245 GO:0031124
Seca4g09856 203 Gene3D - 122 203 IPR015943 GO:0005515
Seca4g09856 203 SUPERFAMILY WD40 repeat-like 126 202 IPR036322 GO:0005515
Seca4g09856 203 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 174 203 - -
Seca4g09856 203 ProSiteProfiles Trp-Asp (WD) repeats profile. 174 203 IPR001680 GO:0005515
Seca4g09856 203 ProSiteProfiles Trp-Asp (WD) repeats profile. 132 164 IPR001680 GO:0005515
Seca4g09856 203 SMART WD40_4 120 164 IPR001680 GO:0005515
Seca4g09856 203 SMART WD40_4 167 203 IPR001680 GO:0005515
Seca4g09856 203 MobiDBLite consensus disorder prediction 30 50 - -
Seca4g09856 203 MobiDBLite consensus disorder prediction 1 24 - -
Seca4g09856 203 MobiDBLite consensus disorder prediction 1 88 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09856 K15542 - gmx:100788493 315.464