Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09826 ATGGAATACTTGAAATTCATCCCACTAATTTCCTTTGTATATGCATGCATTCATATCTTGGTATGTGGCCTTAGCAGGAAAAGCACAAAATCTCCCAAACTCCCACCAGGTCCTCCATGTTATCCCATCATAGGAAACATATTACAACTTGGACAAACCAAACTGCACCAAACACTTAGTAAACTCTCCAAAACATATGGGGCAATTATGACTGTTAAGATAGGCACTATTACCACAGTGGTAATTTCCTCACCAAACCTGGCCAAAGAAGCACTTCATAAAAATGACCAAGCCTTAGCTAGCCGATTAATACCGGACTCTGTCCAAGCACTTTCACATGATAAAGCTTCTGTGATATTCATGCCTGTATCAGCAAAATGGAAGACCTTTAGAAAAGTTTGTGCTACCAAGATATTCTCTTCTCAACAGCTTGATTCAACTCAAGCTCTTCGCGGAGAAAAGCTGAAAGAACTAGTTGCTTACTTGCAAGAAAATTGCAGAAAGGGTCAAGCTATTGATATTGGTGAGACTGCATTTACTACAGCGCTTAACACAATATCAAACACCCTTTTCTCCATGGACTTGGCTAGCTATACTTCTGGTTCTTCTCAAAAATTTAGGAATGTTATTTCCCGTATGCTGGTGGAAGCTTCAAAGCCTAATGTTGTAGACTATTATCCTATTTTACGTAGATTTGACCCTCAGGGAGCACGACGAAGGATGAAAAACTATTACCAGACGTTGCTTACTCTTTTTGAGTCTATCATTCAAGAAAGAATTCAAAACAAAGATTCCATCCAAGGAAGTGATGTGTTAGACTCTTTTCTCAATATCATCCGAAACGAAGATTCTGAATTAACACGCCATGATGTGTTGCATCTATTTCTGGACTTATTTGTCGCTGGGATGGACACCACATCAGCCGCAATAGAATGGGCTATGGCAGAGTTGCTACACAACCCAGAGAAATTGAAGAAAACCAGGAATGAACTTCAACATGTCCTCAGCAAAAATGGAGAACCTAAAGATTCAGATATCACTAAGCTCCCTTACCTACAGGCAGTTGTTAAAGAAACCTTTAGATTGCATCCACCAGCCCCCATACTAGTCCATAAATCAGTGACTGAGGCAGACATAAGTGGCTTCAGGGTACCCAAAGATGCACAGGTTCTTGTCAATGTATGGAGCATGGGACGAGACTCAAGCATTTGGACAGACCCAAATTCGTTTCTACCTGAAAGGTTTCTACAAAGTGAAGGGGATTTTAGGGGAGAAGACTTTGGATTCATCCCCTTTGGAGCTGGTAGAAGAATGTGTCCTGGTGTTTCACTTGCTCACAGAGTTGTGCATACCACGCTGGCCTCACTTCTGTACCATTTTGATTGGAAGCTCGCAGATGGGCAAAAATCAGAAGTCATGGACATGACTGAAAAATTCGGGGTTACTTTACACAAAGTCAAGCCTCTCATGGCCATTCCCGTTAAAGGATAG 1491 0.4138 MEYLKFIPLISFVYACIHILVCGLSRKSTKSPKLPPGPPCYPIIGNILQLGQTKLHQTLSKLSKTYGAIMTVKIGTITTVVISSPNLAKEALHKNDQALASRLIPDSVQALSHDKASVIFMPVSAKWKTFRKVCATKIFSSQQLDSTQALRGEKLKELVAYLQENCRKGQAIDIGETAFTTALNTISNTLFSMDLASYTSGSSQKFRNVISRMLVEASKPNVVDYYPILRRFDPQGARRRMKNYYQTLLTLFESIIQERIQNKDSIQGSDVLDSFLNIIRNEDSELTRHDVLHLFLDLFVAGMDTTSAAIEWAMAELLHNPEKLKKTRNELQHVLSKNGEPKDSDITKLPYLQAVVKETFRLHPPAPILVHKSVTEADISGFRVPKDAQVLVNVWSMGRDSSIWTDPNSFLPERFLQSEGDFRGEDFGFIPFGAGRRMCPGVSLAHRVVHTTLASLLYHFDWKLADGQKSEVMDMTEKFGVTLHKVKPLMAIPVKG. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09826 496 SUPERFAMILY Cytochrome P450 35 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 Gene3D Cytochrome P450 20 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 Pfam Cytochrome P450 35 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Seca4g09826 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 CDD CYP76-like 63 493 - -
Seca4g09826 496 FunFam Cytochrome P450 76C4 26 492 - -
Seca4g09826 496 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09826 496 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 495 - -
Seca4g09826 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09826 Seca-Chr4 230430384 230432700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09826 9 495 Cytochrome P450 AT2G45550 45.363 3.32e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09826 - - lja:Lj0g3v0020129.1 689.493