Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09813 ATGGAAAAGAAAGGAGAAGCCAACCAAGATCATAATAACCACCCATCTCCCCACCCTTTTGATAACACCATAACCACTAAGGAAGAGTCTATAAGGAAACCAATTGGTGGTGGTGGTGATAGGGTGAAGAGGGATGAGTGGAGTGAAGGAGCAGTGTCTACACTTCTTGAAGCCTATGAAGCCAAATGGCTACTCAGAAACAGAGCCAAACTCAAAGGCCAAGACTGGGAAGAAGTTGCAAGACACGTGTCATCACGAGGGGACTGTACAAAGTCACCAAAGACATCAACACAGTGCAAGAACAAAATTGAGTCCATGAAGAAGAGGTACCGATCAGAATCAGCAACTGCAGATGTTTCTTCTTGGCCTCTATACTCACGTCTTGATCTTCTTCTGCGTGGAACTGGGCCAGTCATGTCCACACAACAGACCACACTGCCACCGGCAACGGCGGTGGCGCCACCTTCTCAGACACCGTTGGTGGTGTTGGAGCCATCAGTGGCAGCGGTTTCACATCCACCTCCAGCTGCTGATCCTCCACCAATTTCAAATGCACCAAACTCACATGGATCCAATGGTGTTGATAAGCTACCCAAGGAAGATGGGTTAGCAACAAAGTCATATGAGCATGTTTCTAATAAGAATAATCCATTGGACACGGATAGCAGCACTACGCCTGCGCTTTATAGCAAGAAGGAAAAGTTAATTAGATGTAACAAGAGGAAGACGAAAAATGAGAACAACAAGCGAAGAAGGAAAGAATATGTGGAAATAGCAGAGAGCTTAAGATGGCTAGCAGAAGCTGTGGTGAGGTCAGAACAAGCAAGAATGGAGACAATGAAAGAGATAGAGAAGATGCGACTTGAAGCTGAGGCCAAGAGAGGTGAAATGGATCTTAAGCGAACTGAAATAATTGCCAATACACAATTAGAGATTGCTAGGATCTTCGCAAGTGTCAACAAAGGTGTTGATTCATCTTTAAGAATTGGGAGAAGTTGA 999 0.4505 MEKKGEANQDHNNHPSPHPFDNTITTKEESIRKPIGGGGDRVKRDEWSEGAVSTLLEAYEAKWLLRNRAKLKGQDWEEVARHVSSRGDCTKSPKTSTQCKNKIESMKKRYRSESATADVSSWPLYSRLDLLLRGTGPVMSTQQTTLPPATAVAPPSQTPLVVLEPSVAAVSHPPPAADPPPISNAPNSHGSNGVDKLPKEDGLATKSYEHVSNKNNPLDTDSSTTPALYSKKEKLIRCNKRKTKNENNKRRRKEYVEIAESLRWLAEAVVRSEQARMETMKEIEKMRLEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09813 332 MobiDBLite consensus disorder prediction 25 44 - -
Seca4g09813 332 Pfam Myb/SANT-like DNA-binding domain 44 130 IPR044822 -
Seca4g09813 332 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 22 318 IPR044823 -
Seca4g09813 332 MobiDBLite consensus disorder prediction 1 44 - -
Seca4g09813 332 Gene3D - 47 112 - -
Seca4g09813 332 FunFam Trihelix transcription factor ASIL2 47 112 - -
Seca4g09813 332 MobiDBLite consensus disorder prediction 169 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09813 Seca-Chr4 230312239 230316111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09813 33 184 Trihelix Transcription Factor Family AT3G14180 33.333 3.19e-20 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca4g09813 Myb_DNA-bind_4 8.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09813 - - gmx:100793978 402.905