Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09757 ATGGCCACTGAAAAGCTTACGTCTTGTGCAAAATTCATTGAGAACTCTAAACCATACTTTGCCATGATATGTTTACAGTTTGGGTATGCTGGCATGAATATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCCACTATGTCCTTGTGGTCTATCGCCACGCCTTTGCAACTGCTGTTATCGCTCCATTTGCTTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAATTTTCGTGCAAATTTTCGTCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGTAACATGCTTCCAGCCATGACTTTTGTCATGGCAATTTTATGCCGGATGGAGAAGATAAACATAAAGAAAGTGAGGTGCCAAGCAAAGATAGTGGGAACATTAGTGACAGTAGCTGGGGCAATGCTGATGACTTTATACAAAGGCCCTATTGTGGAAATGATATGGGCCAAACATGCTCATGATCCTCACAATAAAACCCATGCACCAACCTCCACTGGATCCTCTGACAAAGATTGGTTCTTAGGCTGCATCTTCCTTATCATTGCCACCCTTGCCTGGGCTTCCCTCTTTGTTTTGCAAGCCAAAGCTATAGAGACGTACAAGAATCATCAGCTAAGCCTCACTTCACTTGTCTGCTTTATTGGCACTCTTCAAGCTGTTGCTGTTACTTTTGTTGTGGAGCACAATCCTTCTGTTTGGAGAATTGGTTGGGATATGAATTTACTTGCTGCTGCCTATGCAGGTATTGTGACCTCAAGCATATCATACTATGTACAAGGGCTGGTGATTAAGAAGAAAGGACCTGTCTTTGCAACTGCTTTTAGTCCTTTAATGATGATCATTGTTGCCATCATGGGCTCCTTTATCCTTGCAGAACAGATTTATCTTGGAGGTGTGATTGGTGCCATCTTGATAGTTATAGGCCTATACTCTGTTCTGTGGGGAAAGCAAAAAGAACGAATAGAGACTAAAGTAGCAGATGACATTCCCTTGCCTGTGAAAGGTGCTCAAATGGGTGGAATTGCAGGGTCAGTGATTGATGACACAGATCATTTCTCTCAACTAAAATCTGGTCAGAAAGGGGAAGACAATAACAAGCTCTCTTCAGTTGTAATAAGCATGCCTATTAGAGAGCCAACAAAAGTTAACCAAGAAGCAGAGGCTTAA 1233 0.4225 MATEKLTSCAKFIENSKPYFAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFPIFVQIFVLALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAILCRMEKINIKKVRCQAKIVGTLVTVAGAMLMTLYKGPIVEMIWAKHAHDPHNKTHAPTSTGSSDKDWFLGCIFLIIATLAWASLFVLQAKAIETYKNHQLSLTSLVCFIGTLQAVAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKQKERIETKVADDIPLPVKGAQMGGIAGSVIDDTDHFSQLKSGQKGEDNNKLSSVVISMPIREPTKVNQEAEA. 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09757 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 340 - -
Seca4g09757 410 PANTHER WAT1-RELATED PROTEIN 18 345 IPR030184 GO:0016020|GO:0022857
Seca4g09757 410 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Seca4g09757 410 Pfam EamA-like transporter family 196 335 IPR000620 GO:0016020
Seca4g09757 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09757 Seca-Chr4 229305906 229308710 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09757 1 400 Nodulin-like Gene Family AT5G07050 67.901 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09757 - - gmx:100804390 694.115