Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09755 ATGGCCATTGAAAAACATAGAGGTTATGCACAATTTCTTGGGAACTCTAAACCCTATGTTTCCATGATCCTTTTACAATTTGGCTATGCTGGCATGAACATTATCGCTAAGCTTTCCCTCAACCAAGGCATGAGCCACTACGTCCTCGTGGTTTATCGCCACGCCTTTGCAACTGCTGCCATAGCTCCATTTGCCTTTATTTTTGAAAGGAAACATCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTCATCTTAGCTCTCCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGTAACATGCTTCCAGCCATGACTTTTCTTATGGCAATTTTTTTCCAGATGGAGAAGATAAACATAAAGAAGATGAGATGCCAAGCAAAGATATTGGGAACATTAGTGACAGTGGTTGGGGCGATGCTAATGACTTTGTATAAAGGGCCTATTGTGGAGTTGGTATGGGCCAAACATACCCATCCTCACAATAAAAGCACCACTGGATCCTCGGTTGACAAAGATTGGTTAGTAGGCAGCATCTTCCTTATTATTGCCACCTTTGCTTGGTCTTGCCTCTTTATTCTACAAGCCAAAGCTCTAGAGACATACAAGAATCATCAGCTAAGCCTCACTTCACTTGTTTGCTTCATAGGCACTCTTCAAGCTGTTTGTGTTGCTTTTGCTGTGGAGCACAATTTTTCTGTATGGAGAATTGGCTGGGATATGAACTTACTAGCTGCTGCCTACGCAGGTATTGTGACCTCAAGCATATCATACTATGTACAAGGGCTGGTGATTAAGGAGAAAGGACCTGTCTTTGCAACTGCCTTTAGTCCTCTAATGATGATCATTGTTGCCATCATGGGCTCCTTTATCCTTGCAGAACAGATTTATCTTGGAGGTGTGATCGGTTCCATCTTGATAGCTATAGGCTTATACTCTGTCCTGTGGGGGAAGCACAAAGAACAAATACAGAATAAAGTAGCAGATAGTATTTTGCCTGTGAAGTGTGATCAAATGGCTGGAATTACAGGGCCAGTGGTGATTGATGCCACAGATCAATTTGCTGAAGTAAAATGTTGTCAGAAAGGAGAAGCCAACAAAAGCTCTTTAGCTGTGATAAGCATGCCTATTAGAGAGTCTCCAAAAGTTAACCAATAA 1206 0.4179 MAIEKHRGYAQFLGNSKPYVSMILLQFGYAGMNIIAKLSLNQGMSHYVLVVYRHAFATAAIAPFAFIFERKHQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFLMAIFFQMEKINIKKMRCQAKILGTLVTVVGAMLMTLYKGPIVELVWAKHTHPHNKSTTGSSVDKDWLVGSIFLIIATFAWSCLFILQAKALETYKNHQLSLTSLVCFIGTLQAVCVAFAVEHNFSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKEKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGSILIAIGLYSVLWGKHKEQIQNKVADSILPVKCDQMAGITGPVVIDATDQFAEVKCCQKGEANKSSLAVISMPIRESPKVNQ. 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09755 401 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0016020|GO:0022857
Seca4g09755 401 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Seca4g09755 401 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Seca4g09755 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
Seca4g09755 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09755 Seca-Chr4 229275649 229282228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09755 1 396 Nodulin-like Gene Family AT5G07050 65.174 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09755 - - gmx:100804390 612.838