Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09753 ATGAGAGGGAGAGCATCTTGTTCTTCCATTCCAATTCCATCGATTCCCTTTTTCTTCGTCTTCCTCGCCCTCGCCGTCTTTACAGTTCCAGGATCGTTGGGGGACTGCTCCGAATACGATCACAAACCAATGGCCGCGCCCGGAGGCTTGCGCGATTCCCAAGGATCTCAGAACAGCGCTGAAATCGAATCCCTTGCTCGATTCGCAGTCGACGAACACAACAAGAAACAGAATGCGCTTCTGGAATTTGCAAGGGTGGTGAAAGCGCAGGAACAGGTTGTTGCTGGTACCCTGCATCATCTTACTCTTGAGGCTATTGATGCGGGTGAGAAGAAGATCTACGAAGCCAAAATCTGGGTGAAACCTTGGATGAACTTCAAAGAACTCCAAGAGTTCAAGCATGCTAGTGGTGCACCGTCGTTTACCTCTGCAGATCTTGGTGTGAAAAAAGCTCTCTTTCTGTTTTTATTATCAGATGGCCATAAACCAGGATGGCAATCTGTGCCAACACAAGACCCTCAAGTTCAGGATGCAGCAAATCATGCTATCAAGACCATCCAGCAGAGGTCTAATTCGCTAGTGCCCTATGAGCTTCATGAGGTTGTCATCGATGATGTTGCCAAGTTTAATCTGCTCCTTAAGGTCAAACGCGGAGAGAAGGAAGAGAAGTTCAAGGTAGAGGTGCACAAGAATAACGAAGGAAGGTTCCAGCTGAATCAGATGGAACAAGATCATTCCTAA 741 0.475 MRGRASCSSIPIPSIPFFFVFLALAVFTVPGSLGDCSEYDHKPMAAPGGLRDSQGSQNSAEIESLARFAVDEHNKKQNALLEFARVVKAQEQVVAGTLHHLTLEAIDAGEKKIYEAKIWVKPWMNFKELQEFKHASGAPSFTSADLGVKKALFLFLLSDGHKPGWQSVPTQDPQVQDAANHAIKTIQQRSNSLVPYELHEVVIDDVAKFNLLLKVKRGEKEEKFKVEVHKNNEGRFQLNQMEQDHS. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09753 246 Gene3D - 44 142 - -
Seca4g09753 246 SUPERFAMILY Cystatin/monellin 161 241 IPR046350 -
Seca4g09753 246 SMART CY_4 45 135 IPR000010 GO:0004869
Seca4g09753 246 SUPERFAMILY Cystatin/monellin 52 136 IPR046350 -
Seca4g09753 246 FunFam Cysteine proteinase inhibitor 162 245 - -
Seca4g09753 246 ProSitePatterns Cysteine proteases inhibitors signature. 91 104 IPR018073 -
Seca4g09753 246 Pfam Aspartic acid proteinase inhibitor 59 134 IPR000010 GO:0004869
Seca4g09753 246 CDD CY 48 134 IPR000010 GO:0004869
Seca4g09753 246 Gene3D - 163 243 - -
Seca4g09753 246 PANTHER CYSTATIN FAMILY MEMBER 44 200 IPR027214 GO:0004869
Seca4g09753 246 FunFam Cysteine proteinase inhibitor 44 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09753 Seca-Chr4 229249137 229253214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09753 - - gmx:547777 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09753 4 229249137 229253214 Seca4g09753 4 229249137 229253214 ECH