Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g09731 | ATGGAGATGGAGGGAACACAACTCAGTGTGAGATTAATAACCTTTTCTTTCTTGCTATTGTTGAGCTTCAACTCACTTGTTACAAAGGCACAATCACCCAACTACTTGGGAGATGACTGCCGTAGTACCATCCCAAAAGCTCTCACCACTGCCTACAAAACCAATCTTAACACCACCTTCTCATGGCTAACCACTAATGCAGCCACAAGCAAAGGTTATAACCATACCACCATAGGCAACAAAACCTCAGGTGATGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTAGTTGGATACTTCTGTCAATTCTGTGTCTCTACTGCCACTAGAGATGTTCTTCAGCGCTGCCCCAACAGAGTCTCTGCTGTTGTATATTATGATTTCTGCATTCTCAGGTTCTCAAATGAAAACTTCTTTGGGAATGTTACAATAGACCCTTCATGGCATGATCTTGGAACAAAAAACATCTCTAGTGTAGCAGAGATTCAGAAAGGTGAGGACTTTATGAGAAGTTTGATCAGAAAAGCAACTATAGAGACCAAACAGTTGTTCTTTGTGGGTGGTTTCAATTTGAGTTCTACTGAGAGAAGGTATGGCATGGTGCAATGCAGCAGAGATCTTACAGATGAGGGGTGTAGACAGTGTTTAGAGGTCATGTTAGCAAAAGTTCCCAAATGTTGTGCACAAAAGAAAGGGTGGGTGGTTGGGTCTGCAAGTTGTCTCATGAAGTATGATGATTACATGTTCTATCTTTTTCACAACCAAGCATCTTCAGCTCCTCTGCCTGATCAGCAAACAGGAAAACAAAGGGGTAATGCTAGTAAGTCAAGAAAGTTGATCATTGGCTTCTGTGTCCTGGGGTCAGCAGCTCTACTATGTTTCAGTGTCTACTGCTTCTGGTGCAGGAACAGAGTTAGAAAAGGTAATTTGTTTCCTAATTGGCTGATACGTAACAACATTATTCTATCTTCACATGAGGAAACACTGAATGCAGACCTGCCTACAATCCCATTAATCACAATTCTACAGAGTACTGATAACTTTTCAGTAGCATCTAAATTAGGAGAAGGTGGATTTGGACCCGTTTACAAGGGAACTCTACCAGATGGAAGACAAATTGCAGTGAAAAGGCTCTCAAAAGCTTCTGGTCAAGGGTCAGAGGAGTTCAAGAATGAAGTAATGCTTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGCTACTTGTGTATGAGTATTTGTCAAATGCAAGTCTTGACTTTCACCTCTTTGATGATGAAAAAAGAAAGCAACTAGACTGGAAACTAAGATTAAGCATTATTAATGGAATAGCAAGAGGTATTTTATACCTTCATGAGGATTCTCGACTCAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTATTAAATCATGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTCAAACGGGACAGAACCAGGCAAATACAAATCGAGTAATGGGAACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCAGTAAAATCTGATGTTTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTAGTGGGAAAAAGAATAGTGGATTTTATCTTTCAGAACATGGCCAAAGTCTTCTTTTATATACATGGAAAAAATGGTGCGAAGGAAAATGTTTGGAACTAATGGATTCATTACTGGAAACATCCTTCATAGCCAGTGAAGTTGTGAAGTGCATACAGATTGGATTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCAAGTGTTGTTGTAATGTTGGCGAGTGACACAATGGCCCTTCCAAGACCCAAACAGCCAGCATTTTCTGTTGGAAGAATGACCTTAGAGGATGCATCTACTTCACAAAGTTCCAAGAATCTTTCTATCAATGAAGTAACAATCTCTAACATTTTACCAAGGTAA | 2004 | 0.3972 | MEMEGTQLSVRLITFSFLLLLSFNSLVTKAQSPNYLGDDCRSTIPKALTTAYKTNLNTTFSWLTTNAATSKGYNHTTIGNKTSGDAVYGLYDCRGDVVGYFCQFCVSTATRDVLQRCPNRVSAVVYYDFCILRFSNENFFGNVTIDPSWHDLGTKNISSVAEIQKGEDFMRSLIRKATIETKQLFFVGGFNLSSTERRYGMVQCSRDLTDEGCRQCLEVMLAKVPKCCAQKKGWVVGSASCLMKYDDYMFYLFHNQASSAPLPDQQTGKQRGNASKSRKLIIGFCVLGSAALLCFSVYCFWCRNRVRKGNLFPNWLIRNNIILSSHEETLNADLPTIPLITILQSTDNFSVASKLGEGGFGPVYKGTLPDGRQIAVKRLSKASGQGSEEFKNEVMLIAKLQHRNLVRLLACCLEENEKLLVYEYLSNASLDFHLFDDEKRKQLDWKLRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLNHEMNPKISDFGLARAFQTGQNQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIISGKKNSGFYLSEHGQSLLLYTWKKWCEGKCLELMDSLLETSFIASEVVKCIQIGLLCVQEDAADRPTMSSVVVMLASDTMALPRPKQPAFSVGRMTLEDASTSQSSKNLSINEVTISNILPR. | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g09731 | 667 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 470 | 482 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g09731 | 667 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 148 | 250 | - | - | |
Seca4g09731 | 667 | CDD | STKc_IRAK | 355 | 620 | - | - | |
Seca4g09731 | 667 | ProSiteProfiles | Gnk2-homologous domain profile. | 145 | 250 | IPR002902 | - | |
Seca4g09731 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 317 | 424 | - | - | |
Seca4g09731 | 667 | Gene3D | - | 150 | 250 | IPR038408 | - | |
Seca4g09731 | 667 | Gene3D | - | 38 | 139 | IPR038408 | - | |
Seca4g09731 | 667 | Pfam | Salt stress response/antifungal | 168 | 248 | IPR002902 | - | |
Seca4g09731 | 667 | Pfam | Salt stress response/antifungal | 49 | 136 | IPR002902 | - | |
Seca4g09731 | 667 | SMART | serkin_6 | 349 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g09731 | 667 | Pfam | Domain of unknown function (DUF3403) | 622 | 667 | IPR021820 | GO:0004674 | |
Seca4g09731 | 667 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 49 | 663 | - | - | |
Seca4g09731 | 667 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 36 | 138 | - | - | |
Seca4g09731 | 667 | FunFam | Liguleless narrow1 | 425 | 628 | - | - | |
Seca4g09731 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 425 | 628 | - | - | |
Seca4g09731 | 667 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 316 | 424 | - | - | |
Seca4g09731 | 667 | Pfam | Protein tyrosine and serine/threonine kinase | 351 | 619 | IPR001245 | GO:0004672|GO:0006468 | |
Seca4g09731 | 667 | ProSiteProfiles | Protein kinase domain profile. | 349 | 635 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g09731 | 667 | ProSiteProfiles | Gnk2-homologous domain profile. | 34 | 139 | IPR002902 | - | |
Seca4g09731 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 336 | 653 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g09731 | Seca-Chr4 | 228533585 | 228537702 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g09731 | 14 | 667 | Receptor kinase-like Gene Family | AT4G05200 | 41.082 | 1.49e-174 | 512 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca4g09731 | PK_Tyr_Ser-Thr | 7.1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g09731 | - | - | gmx:100795922 | 1026.54 |