Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09721 ATGGCTGAGCGAGCATCCTTTGCCTACGATGTGTTCCTCAGCTTCAGAGGTAAAGATACACGATTAGGTTTTACTGGATACCTCTACAGTGCTCTCTGTCAAAGGGGAATCCATACCTTCTTTGATGATCCGGAGATTCGTAAAGGAGAGGAACTCACCCCAGCACTCCTCAAGGCAATTAAAGAATCCAGGATTGCCATCACCGTGCTCTCTAAAAACTACGCTTCTTCATCTTTTTGTTTAAAAGAACTTGCCGAAATCCTTGAGTGCTTCAAGGAGAAGAAGGATCGGCTAGTATTACCGGTTTTTTATGGGGTAGATCCTTGTGATGTGCGACACGAGAGAGGAAGTTATGGAGAAGCATTGGCTAAGCATGAGGAGAGGTTCAAGGATGATAAAGAGAAAGTCAACAAATGGAGGATGGCTCTACATCAGACAGCTAACCTCTCCGGCTTTCCTTTCAAGCTTGGGGATGGATATGAATGTGAATTTGTTGGGTCGATCGTTAAGGAAGTCTCCCGCAAGATTAATAGTACACTTTTACATGTTGCTGATTACCCAGTTGGATTGGAGTCTCGAGTGGGTAAAGTAAAGTCTCTTCTGAATGTTAAGTCTAATCATGGAGTCCACATGGTAGGTATATGTGGAATTGGTGGAATAGGTAAAAGTACAATTGCTCGAGCAGTATATAATTCCATTAGTGACCACTTTGAAGGTTTCTGTTGTTTTCTCGAAGATGTGAGAGAGAATTCACGTAAATATGGCTTAGTACATCTCCAAGAGAAGGTTCTTTCTGAGATACTTGGAGAAAAGGATATTAAGTTAGGAGGTATGTGGAATGGTATGGCAGTAATACAGCATAGGCTCCAAAGTAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACAAAAAAGAGCAGTTGCAGGCTATTGTTGGAGCACGTCAATGGTTTGGTATTGGTAGCACAATCATCATCACGACTCGGGACAGTGGTTTGCTAAATATCCATGAGGATGTAAGCAAATATGAGGTGGAAGAGTTAAAAGATGAAGAAGCTCGTGATTTGCTTAGTTGGTACGCTTTTAAAACTAACAAAGATGATCCAAAGTACATCAACATGTTAAACCGTGCAGTTGGTTATGCTTCTAGGCTTCCATTGGCTTTGAAAATAATAGGTTCCCACTTGTCTGGAAACAAAGATGAAGAAGAATGCAAACTTATATTAGATCGGTATGACAGCATTCCTGATGGAGAGATCCAAGCTGTACTAAGAGTAAGCTATGATTCCTTGGAGGGAAATGAGAAGCAAGTTTTTCTTGACATTGCCTGTTGCTTCGGAGGATACAAATTGTCAGACGTTGAAAATATACTTCATGCTCATCATGGTTTTTCGGTGAGACTCAGTATTGAACAGTTGATTAAAAAATCTCTCATAAAAGTTGATAATGGTCTTGTGACATTACATAATTTGATACAAGACATGGGGAGAGAAATTGTGCGACAGGAATCAAAAGAGCCTGGCGAATGCAGTAGGTTGTGGATCTGTGAAGATGTGGTCCGTGTTTTAGAAGAAAAAAAGGGAACTAGCAAAATTGATATTTTAATTCTGGATTTCCCCAAAGATGAAGTACACTCAAAAGGACCCAATGGTGAAGAAGTGCAATGGGATGGAGAGGCCTTCAAGCAGATGAAAAACCTCAAAACACTTATTATTAGAAATGTTCGCTTTTCCCAAGGTCCAACACATCTTCCAAATAGTTTAAGAGTATTAAAATGGTGGGGATATCCTTCACCATCTTTACCAGCTGAGATACCTGATGTATCTTGTGTCCCAAAGTTAGAAAAATTGTCACTTAAACACTGTAACAAGTTAACTAAAATTGATGTCTCAGTTGGACATCTGGATAATCTTGAAATCTTGGATGCTTCTAGTTGCAAGAATCTTGAGACTTTTCCATCCATCAGATTGACCTCTCTTAAACAACTCAATCTTTCACATTGCTCAAATCTAAAGAGTTTCCCAGAAATATTGGGGAAGATGGAAAATATAACAGAGCTTCATGTAGTGGGGAGTCCTATAAAAGAATTGCCATCTTCCATTCAAAACCTTACTGGGCTTCAAAAATTAGAACTGCAATTCTGTGGAATAGTTCAGCTACCAAGTAGCATTGTCATGATGCCAAAACTGAGTATGATGCATGTTTCGAGATGTGAAGGGTTGCAATTATCTAAGCAGGACAAAGCTGATGAAATGAAATCTTCGAATACAGAATGTCTTATTCTCTCATACTGTGATATATCTAATGAACTCCTTCCAATAGATACTTGGTTTGCCAATGTGAAAGATTTAAACCTATCAGGGAATAATTTCACAACTCTTCCTGCATGCATAAAAAATTGTCACCTTCTGAGAATCCTTAAGCTGGATGATTGCAGACTTCTACGAGAAATTAGAGGGATTCCAAGGAAATTAGAAATATTTTCTGCAAAAGGATGCACAGCCTTGAAATCCTTAGACCTCAAAGTTCTTCCTGCATGCTCTGAAGAATGTCACATTTTGAAGGAATTGATTTTGGATGATTCTTGGCATCTTAGAGAAATTCCAGGACTTCCACCAAACTTGGATCATTTCTCTGCAAAAAACTGCATATACTTGACTCCCGAGCATAAAAGCATGCTGGTGAATCAGGAAATGGTAGAGGGTGGAAACAAGATGTTTGTTTTGCCTGGAACAAAGATTCCAGATTGGTTCACGCATCGTACAAGCAGAGGCTGGTCAATGGCTTTCTGGTTTCGTAACAAATTCCCTGTGATTTCTCTGTGTCTTGTTATTGGACTGGTGAATGAGCAACCTATCACAGTCAAGTTTAGCCCCAGAATATTCATCAATGGCAAGAAACAGTCCCTTGCCAGTGGGAAAGTTTACAAGTTCAACATAAGAACTGATCATATATTTTTGTTTGAAATACAGCTGCTAAATTTTGAAGATGATGTGAATTCAGAATCAGATACGGAGTGGAAACGTGTGGAGGTCTTGTATGCAGATCATATCACTGACAATGAAGTCCCAATAAGACGGGTTGCCAAACATGGTGGAATCCATGTATTAAAACAAACAAGTAGCATGAAGGATATTCAATTCACCGATCCAAATGTTCCAAACAAAAGAAAGACAAAATCATGTCAGGAATCCCCATATACACAGAATCAACAACATGTGGAGCACAACAAGGAGCAGTTTTCATCGCTTCCTGCACAAGCAACAGAAAATGTGAACTGTGATCCAGATTCAATGGAGGGGTCAAGTCAGACAGTTTCAAGAAAGAGACCCGGAAAAGACCAGAATATGCCTAGGGAAGATGCTGGAGGAGGAACTTCAGAGAGGCTTCCTAAGGATGAAGATTTTGCAGAGGCTTCCAACACAGAAGGTTCTCACTCAGATGATCTATTCCACCAGGTCAATGGAAAATACCCTGTTAGTGGCAAGGAAACCATATCATGTGGGGCGATTTTTGGAGATGCATCTCTGATACCTATTAGAAAGGCTATTAACGACTTGGAGCTGTTAAAGGTTAATAAGGACCTATCTAAAGTCTCTTCTGATCATGCCACGCGGTGTCAACTTCATAACCTCCTGGATACATTGTGCAGAAGTAGGCATCCTAAGGTGACAGTAGAGGTGAAGGAGGCTATTGTCAAGTTCAAGACCAACTTTGCTACTATTAAATCTGTGAACAATCTGAAGAATTCTGAGGCAGAAAGGAAGGAGAAGCTAGAGGCAGAAATTGAAACTTTAAAGAAACAATTAACTGCCAAAGAAATGGACCTCCAACAACTTGTTTTGAATCTCAAAAATCAAGATGCAAAACTCTCAACCTGTTCAACAAATTGTACTTCTCTCAAAGAGAAAACTCGAAAGCTATTAAAAGAAGTTGATGATATACTGGCTGCACTGAGTGGAACGAAGGATGTGGGTGAAGCCATTGAAGTAATGCAGAATAGGCTTCAGGATCAGGAGGCAACACTAGTCTCACCCTATTCAACGAGCTGTGCTTCTCTGAACGAGCGAGCTCGGGCTAGATCACTATTAAAACAAGCTGATGATCTACTTGCTACAAGCAATGGAATTGGAAAAGAGCATGATGGTGAAGTCGCTGAAGAAGAGCAGAATGGGCTCAAGTGGGCATGGCCTACTGACCTATCTTGCGAGCTTAATAAGATTAAGAGTAGCATTCTTGGATGA 4242 0.4008 MAERASFAYDVFLSFRGKDTRLGFTGYLYSALCQRGIHTFFDDPEIRKGEELTPALLKAIKESRIAITVLSKNYASSSFCLKELAEILECFKEKKDRLVLPVFYGVDPCDVRHERGSYGEALAKHEERFKDDKEKVNKWRMALHQTANLSGFPFKLGDGYECEFVGSIVKEVSRKINSTLLHVADYPVGLESRVGKVKSLLNVKSNHGVHMVGICGIGGIGKSTIARAVYNSISDHFEGFCCFLEDVRENSRKYGLVHLQEKVLSEILGEKDIKLGGMWNGMAVIQHRLQSKKVLLVLDDVDKKEQLQAIVGARQWFGIGSTIIITTRDSGLLNIHEDVSKYEVEELKDEEARDLLSWYAFKTNKDDPKYINMLNRAVGYASRLPLALKIIGSHLSGNKDEEECKLILDRYDSIPDGEIQAVLRVSYDSLEGNEKQVFLDIACCFGGYKLSDVENILHAHHGFSVRLSIEQLIKKSLIKVDNGLVTLHNLIQDMGREIVRQESKEPGECSRLWICEDVVRVLEEKKGTSKIDILILDFPKDEVHSKGPNGEEVQWDGEAFKQMKNLKTLIIRNVRFSQGPTHLPNSLRVLKWWGYPSPSLPAEIPDVSCVPKLEKLSLKHCNKLTKIDVSVGHLDNLEILDASSCKNLETFPSIRLTSLKQLNLSHCSNLKSFPEILGKMENITELHVVGSPIKELPSSIQNLTGLQKLELQFCGIVQLPSSIVMMPKLSMMHVSRCEGLQLSKQDKADEMKSSNTECLILSYCDISNELLPIDTWFANVKDLNLSGNNFTTLPACIKNCHLLRILKLDDCRLLREIRGIPRKLEIFSAKGCTALKSLDLKVLPACSEECHILKELILDDSWHLREIPGLPPNLDHFSAKNCIYLTPEHKSMLVNQEMVEGGNKMFVLPGTKIPDWFTHRTSRGWSMAFWFRNKFPVISLCLVIGLVNEQPITVKFSPRIFINGKKQSLASGKVYKFNIRTDHIFLFEIQLLNFEDDVNSESDTEWKRVEVLYADHITDNEVPIRRVAKHGGIHVLKQTSSMKDIQFTDPNVPNKRKTKSCQESPYTQNQQHVEHNKEQFSSLPAQATENVNCDPDSMEGSSQTVSRKRPGKDQNMPREDAGGGTSERLPKDEDFAEASNTEGSHSDDLFHQVNGKYPVSGKETISCGAIFGDASLIPIRKAINDLELLKVNKDLSKVSSDHATRCQLHNLLDTLCRSRHPKVTVEVKEAIVKFKTNFATIKSVNNLKNSEAERKEKLEAEIETLKKQLTAKEMDLQQLVLNLKNQDAKLSTCSTNCTSLKEKTRKLLKEVDDILAALSGTKDVGEAIEVMQNRLQDQEATLVSPYSTSCASLNERARARSLLKQADDLLATSNGIGKEHDGEVAEEEQNGLKWAWPTDLSCELNKIKSSILG. 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09721 1413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 441 IPR027417 -
Seca4g09721 1413 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 178 - -
Seca4g09721 1413 MobiDBLite consensus disorder prediction 1044 1110 - -
Seca4g09721 1413 Gene3D - 346 431 IPR042197 -
Seca4g09721 1413 Gene3D Ribonuclease Inhibitor 672 898 IPR032675 -
Seca4g09721 1413 SMART till_3 8 149 IPR000157 GO:0007165
Seca4g09721 1413 SUPERFAMILY L domain-like 554 887 - -
Seca4g09721 1413 ProSiteProfiles TIR domain profile. 7 176 IPR000157 GO:0007165
Seca4g09721 1413 Gene3D - 7 176 IPR035897 -
Seca4g09721 1413 Gene3D - 177 342 IPR027417 -
Seca4g09721 1413 MobiDBLite consensus disorder prediction 1044 1131 - -
Seca4g09721 1413 Pfam NB-ARC domain 191 414 IPR002182 GO:0043531
Seca4g09721 1413 Gene3D Ribonuclease Inhibitor 549 671 IPR032675 -
Seca4g09721 1413 PRINTS Disease resistance protein signature 654 670 - -
Seca4g09721 1413 PRINTS Disease resistance protein signature 288 302 - -
Seca4g09721 1413 PRINTS Disease resistance protein signature 211 226 - -
Seca4g09721 1413 PRINTS Disease resistance protein signature 381 395 - -
Seca4g09721 1413 Pfam TIR domain 8 178 IPR000157 GO:0007165
Seca4g09721 1413 SUPERFAMILY "Winged helix" DNA-binding domain 418 523 IPR036390 -
Seca4g09721 1413 Coils Coil 1241 1286 - -
Seca4g09721 1413 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 737 IPR044974 GO:0006952
Seca4g09721 1413 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 152 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09721 Seca-Chr4 228281726 228287458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09721 9 741 WRKY Transcription Factor Family AT4G12020 30.025 2.74e-68 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09721 - - mtr:25501119 1436.78