Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09720 ATGGCAGGCTCCTGTATCTTCAGTTATAGATGGAAGTACGATGTATTCATCAGCTTTAGAGGTGAAGATACCCGCTTGGGTTTTACTTCACATCTCTACAGTGCTCTCAAAAATAGGGGAATCAATACCTTCATAAATGACGAATCCCTTCAAAGAGGAGAGGAACTCACACCAGCACTTGTCAATGAAATGGAAGAATCTAGGCTTGCCATCGTTGTACTCTCCAGGAACTATGCTTATTCTTCATTTTGTTTAAATGAACTTGCCACGATCCTTATGTGTTTTAAGGAAAAGGGTCGCCTGGTTTTACCAATTTTTTATGGCGTGGATCCCTCTGATGTGCAACATCGAAGAGGGAGTTACGGAGAAGCACTGGCTAAGCATGAGGAGAAGTTCAAGGATAATATGGAGAAGGTCAATAAATGGAGGATAGCTCTGGATCAGGCTGCCAATCTGTCCGGCTTCTATTTCAAACTCGGGGATGCATATGAATATCAATTTATTGAGAAGATCGTTAGGTACGTCTACAGCAAGATTAATCGCGCTCCTTTACATGTTGCTGATTACCCAGTTGGATTGGAGTCTCGAGTGGATAAAGTAATCTCGCTTCTGAGTCTTGGGTCTGATGAGATAGTCCACATGGTGGGGATCTATGGAATTGGCGGAATAGGTAAAACTGCAATTGCTCGCGCAGTGTATAATGTGATTAATGATGGGTTTGAAGGTTTGTGTTTTATTGATAATGTCAGAGAAATTTCTATCAAATATGGCTTAGTACATCTCCAAGAGATGGTTCTCTCCCAAATAATTGGAGACAAGGATATCAACATACAGGATGTGCAAGAAGGAATTTCAATGATCCAGAGCATGCTCCAAAGGAGAAAGGTTCTTTTGGTTCTTGATGATGTTGACAAAATAGTGCAGCTTAAAGCTATTGCAGGAGGACTTGATTGGTTCCGTCGTGGCAGTAGAGTCATCATTACAACTCGGGACAAGCATTTGCTAGCAATGCATGGGGTTGAAAAAACGTATGAGGTTGAGGAATTAAGGAAGGAAGAAGCTCTAGATTTGCTCTGTTGGAATGCTTTCAAAAATGAAAACATTGATCCATGTCACACAGACATTTCAAACCGTGCAGTGACATATGCTTCTGGGCTTCCATTGGCTTTGGAAGTAATAGGCTCCCACTTGTTTGGAAAAAGTATAGAAGAATGGAAATCTGCATTAGATCAGTATGAACGAATTCCTGATAATAAGATCGAAAAGATACTCAAAGTAAGCTTTGACTCCTTGGAGGAAGATGAGAAGGAAATTTTCCTTGACATTGCATGTTTCTTTAATGGATATAAACTGGAAGAAGTTGAACATATACTCTCTGCTCATTATGGTATCTCCATGAAATATAGTATTGCAATGTTGATTGGTAAATCCCTCATAAAGATCACTAATGATGGTCTTGTGACATTACATGACTTTATACAAGCCATGGGTAGGGAAATTGTTCGACAGGAATCACCAAAGGAGCCCGGCAATCGTAGTAGGTTATGGTCCTCTGAAGATGTAGTTGAAGTTCTAGAAAACAATACAGGTTCTAGTAGAATTGAAAGCTTAGTTTTGGATTTCCCCAAAGATGAATTACACTTGAATGGACCTGAAGTTGAAGAAGTAAATTGGGATGGAAAGGCCTTCAAGAAGATGAAAAACCTCAAAACACTTATTGTTAGAAATTGTCGTTTTTCCAAAGGCCCATCTCATCTTCCGCACAGTTTAAGAGTACTGAAATGGTGGAGATATCCTTCATCATCTTTACCTACTAATTTTAGTCCAAAGAAACTTGCCATACTTGAGTTACCTGATAGCTTCTTGAAGATGAGTGATCCAATCCAGAGGTTCATATATCTCACAGTTTTGGATTTCAGCTACTGTGAATCATTAACTCATATACCTGATGTATCTGGCCTCGCAAATTTAGAAAAATTCTCTTTTAAGAGTTGTGAGAATTTAACTACCATTCACAAGTCAGTTGGATTTCTGGATAAACTTAGAATCTTGGATGCTGTTTCTTGCATGAAGCTTAGGACTTTTCCACCCATTAGATTGACCTCTCTTGAACTACTCAATCTTTCACAGTGCTCGGCTCTTGAGAGTTTTCCAGAAATATTGGGGAAGATGGAAAATATAACAGAGCTTCATGTAATGGGGAGTCCCATAAAAGAATTGCCATTTTCAATTGGAAACCTCACTCGGCTTCGAAAATTAGAACTACAATTATGTGGAAAGGTTCAGTTACCAAGTAGCATTGTCATGATGCCAGAACTGAGTATGATGCTTGTTTCAAGATGTGAAAGATTGTGGTTACCTGAGCTGGACCAAAGTAATGAAATGGTGTCTTCAAACACAGAAAGTCTTATTCTCTCATACTGCAATATATCTGATGAATTCCTTCCGATAGACCTTAGTTGGTTTGCCAATGTGATAGATTTAAATCTATCGGGAAATAATTTCACAAAGATTCCTGCATGCTTCAAAGAATTTCAATTTTTGAGGAACCTTACGCTGGATGATTGCAGGGATCTACGAGAAATTAGAGGGATTCCATGGAAATTGGAATCACTTTCTGCAAAAGGATGCACATCTTTGAAAGACTTAGACCTCACAGTTCTTCCTGATTTCCCTAAAGAACATCACTCTTTAAGGGAACTTATTTTGGATGATTGTGTGTATCTTCAAGAAATTAGAGGGGTACTGCCAAACTTGGATCATTTTTCTGCAAAAGACTGTACATTCTTGACTTCATGGTGTACAAGCATCTTACTGAATCAGGAAGCAGTAGAGGCTGGAAACAAGATGTTTGTTTTGCCAGGATCAAAGATTCCAGAGTGGTTCACATACTGTGCCAGGGGAGGGTCAATTTCTTTCTGGTTCCGTAACAAATTTCCTAACATTTCTCTCTGTTTTATTATTAGACTGGCGGGAGATCATCCTGTCATGGTCATGTTTAGTCCTATTGTATTCATCAATGGCAAAAAACAGGTCCTTGCTAGTCAGAAAGTCTACAAGTTCACGATAGCAACAGATCATATATTTTTATTTGATCTACAGCTGCCAAAATTTGAAGATAATGTGGACATGGTATGTTCAGGAAAAGAGTGGAGTCGTGTGGATATTTCGTATTCAGATCATATTACCAAGGATGATGTCCCGATCAATGTGGTTACCAAAGAAATTGGAATCCATGTTAAACAAACAACTAGCATGGGGGATATCCTATTCATTGATCCATACTTTAAAAAAAGAAAATCAGATGATTTTCTCTTAACGTGGGAATCAATGGAGGGGCCATCACGTCAAAGAGTACAGACCTCGTTACAAAGACCTTGGGAAACCCTGACTACCACAGTGCCATCTTCATCAATTCTCACATCAATCCCACCTCTACCTGTTGAGGCTAAAAAAGGTCAAGCCTCTCCACCAACACCTTCATTTAGGTTGTTTTTGGATGATGAAGATCATTCTACTGCAATTCAAAATGATACGTTTGTCAATGAAGAAGGTATTGCGAGCGAAGATGTTGAAGCATTTCATGAATTTGTATTGGAGAAGTCTTATCTGGAGTATGAAGATTTGGACTCAGATGATCCCTTTGACCAGGTCAATATGAAACTCTCTGTTAGTGGGAGCGGATCCATATCTCCTGGGGAGAGTTCTGGAGATGGATCTCTAAGATCTATTCAAGGGGTCATGGATGAATTAGAGTTGGTAATGGTCAAGGACTTATCTGAAGTCTCTTCTAATCCTGCCACGCAGTGGCAACTTGATCACCTTCTGGATCAATTGATTACAAGTGGCCACCCTAAGGTGACAGTAGAGGTGAAGGTGGCTCTTGTCGAGTTCAAGAGAAAGGCTTACGAGTCATTCCAAGAATTCCAAGCTACTGTTGAGTCTGTGAACAAACTTAAGAATTTTGAGAAGCATCTGGCCAGAATTCAGCAGGAGACTGATGCAGGCAAGGGTCGATGGAAGGACCTCAAAAACTCAATAAGAAAGGCTTCTTTGGCCTTGAATGCCGAAAATAGTAGGAAGGAGGAACTAGAAGCAGAAATTGCAACTTTAAGGAAACAACTAGCTACCAAAGAAAGGGACCTAGAACAACTTGTGTTGAAGCTCAAGAATCAGGAGGCAACACTCTCTGCCTATTCAACAAGTTTTGCTTCTCTCCACGAGCAAGCTCGAGCTCTATCAAAAGAAGCTGATGATCTACTTGCTGCAAGCAGTGGAATAAAGCATGAGGGTGAAGCCGCTGAAATGAATCAGAACCGGCTCAAGTCGACCTGGTCTTCTGACTTAATTAGCCAGTTTATCAAGATTAGGAAGATGATTCTTGGCCGTTATGATTAG 4398 0.399 MAGSCIFSYRWKYDVFISFRGEDTRLGFTSHLYSALKNRGINTFINDESLQRGEELTPALVNEMEESRLAIVVLSRNYAYSSFCLNELATILMCFKEKGRLVLPIFYGVDPSDVQHRRGSYGEALAKHEEKFKDNMEKVNKWRIALDQAANLSGFYFKLGDAYEYQFIEKIVRYVYSKINRAPLHVADYPVGLESRVDKVISLLSLGSDEIVHMVGIYGIGGIGKTAIARAVYNVINDGFEGLCFIDNVREISIKYGLVHLQEMVLSQIIGDKDINIQDVQEGISMIQSMLQRRKVLLVLDDVDKIVQLKAIAGGLDWFRRGSRVIITTRDKHLLAMHGVEKTYEVEELRKEEALDLLCWNAFKNENIDPCHTDISNRAVTYASGLPLALEVIGSHLFGKSIEEWKSALDQYERIPDNKIEKILKVSFDSLEEDEKEIFLDIACFFNGYKLEEVEHILSAHYGISMKYSIAMLIGKSLIKITNDGLVTLHDFIQAMGREIVRQESPKEPGNRSRLWSSEDVVEVLENNTGSSRIESLVLDFPKDELHLNGPEVEEVNWDGKAFKKMKNLKTLIVRNCRFSKGPSHLPHSLRVLKWWRYPSSSLPTNFSPKKLAILELPDSFLKMSDPIQRFIYLTVLDFSYCESLTHIPDVSGLANLEKFSFKSCENLTTIHKSVGFLDKLRILDAVSCMKLRTFPPIRLTSLELLNLSQCSALESFPEILGKMENITELHVMGSPIKELPFSIGNLTRLRKLELQLCGKVQLPSSIVMMPELSMMLVSRCERLWLPELDQSNEMVSSNTESLILSYCNISDEFLPIDLSWFANVIDLNLSGNNFTKIPACFKEFQFLRNLTLDDCRDLREIRGIPWKLESLSAKGCTSLKDLDLTVLPDFPKEHHSLRELILDDCVYLQEIRGVLPNLDHFSAKDCTFLTSWCTSILLNQEAVEAGNKMFVLPGSKIPEWFTYCARGGSISFWFRNKFPNISLCFIIRLAGDHPVMVMFSPIVFINGKKQVLASQKVYKFTIATDHIFLFDLQLPKFEDNVDMVCSGKEWSRVDISYSDHITKDDVPINVVTKEIGIHVKQTTSMGDILFIDPYFKKRKSDDFLLTWESMEGPSRQRVQTSLQRPWETLTTTVPSSSILTSIPPLPVEAKKGQASPPTPSFRLFLDDEDHSTAIQNDTFVNEEGIASEDVEAFHEFVLEKSYLEYEDLDSDDPFDQVNMKLSVSGSGSISPGESSGDGSLRSIQGVMDELELVMVKDLSEVSSNPATQWQLDHLLDQLITSGHPKVTVEVKVALVEFKRKAYESFQEFQATVESVNKLKNFEKHLARIQQETDAGKGRWKDLKNSIRKASLALNAENSRKEELEAEIATLRKQLATKERDLEQLVLKLKNQEATLSAYSTSFASLHEQARALSKEADDLLAASSGIKHEGEAAEMNQNRLKSTWSSDLISQFIKIRKMILGRYD. 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09720 1465 Gene3D - 180 343 IPR027417 -
Seca4g09720 1465 Gene3D - 8 179 IPR035897 -
Seca4g09720 1465 Gene3D - 348 432 IPR042197 -
Seca4g09720 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Seca4g09720 1465 SUPERFAMILY L domain-like 491 913 - -
Seca4g09720 1465 MobiDBLite consensus disorder prediction 1223 1242 - -
Seca4g09720 1465 PRINTS Disease resistance protein signature 383 397 - -
Seca4g09720 1465 PRINTS Disease resistance protein signature 698 714 - -
Seca4g09720 1465 PRINTS Disease resistance protein signature 290 304 - -
Seca4g09720 1465 PRINTS Disease resistance protein signature 214 229 - -
Seca4g09720 1465 Pfam TIR domain 12 180 IPR000157 GO:0007165
Seca4g09720 1465 Coils Coil 1347 1395 - -
Seca4g09720 1465 Pfam NB-ARC domain 194 431 IPR002182 GO:0043531
Seca4g09720 1465 Gene3D Ribonuclease Inhibitor 525 709 IPR032675 -
Seca4g09720 1465 SMART till_3 12 152 IPR000157 GO:0007165
Seca4g09720 1465 Gene3D Ribonuclease Inhibitor 710 977 IPR032675 -
Seca4g09720 1465 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 771 IPR044974 GO:0006952
Seca4g09720 1465 ProSiteProfiles TIR domain profile. 11 179 IPR000157 GO:0007165
Seca4g09720 1465 Gene3D - 1289 1463 - -
Seca4g09720 1465 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 181 - -
Seca4g09720 1465 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09720 Seca-Chr4 228256305 228262358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09720 7 781 WRKY Transcription Factor Family AT4G12020 32.544 2.45e-89 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09720 - - mtr:25501119 1550.8