Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09716 ATGGAGTGGCTTCTGCAATTCCTCCATCTTCTCTTTCTAGCTTCTCTTCTTATCTGCAACACAGCAATTTCAGATCAAATTCCAAAGCCTTATGTTGTTTATATGGGAAATTCACCACCAAACAACATTGGGGTAGATGGTCAAATACCAGAATCAGCTCATATGCAGTTATTATCATCAATTATTCCAAGAAAAGAGAGTGAGAGGATAGCTCTAATCCACCATTACAGTCATGCCTTTAGTGGGTTCTCTGCAATGCTTACAGAGAGTGAAGCTTCAGCATTGTCTGGCCACGATGGAGTGGTGTCAGTGTTCCCAGATCCAATTCTTCAATTGCATACAACACGGTCTTGGGATTTCTTACAATCAGATTTGGGATTGAAGCCTCGTGTCACTCCTTTACACCAACACTCCTCATCAACTCATGATATCATTATTGCTGTCATTGACACTGGGATATGGCCAGAGTCTCCAAGTTTTAGTGATGTGGGAATGGGGAAGATTCCTTCAAAATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATCTAACTGCAATAGAAAATTGATAGGTGCAAGATACTATAAAACCCAAGTTACATCAGGTGGAAATCAGACTCATATTGAAGCAGCCAAAGGTTCCCCAAGAGATTCTATTGGACATGGAACTCACACTGCATCAACAGCAGCTGGTGTCCAAGTCAACAATGCTAGTTATTATGGTTTGGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCCTATAAAACATGCTCAGAAGAAGGCTGCTCTGGTGCTACCATACTAAAGGCTATTGATGATGCTATTAGGGATGGAGTAGATATAATCTCAATCTCTATTGGACTTAGCTCATTAATGCAATCAGATTTTTTGGATGATCCTATAGCCATTGGAGCATTTCATGCAGAACAAATGGGGGTCATGGTGGTCTGCTCAGCTGGGAATGATGGTCCTGATCCTTACACAGTTGTGAACACAGCACCATGGATATTTACAGTTGCAGCTTCTAATATTGATAGGAACTTCCAATCAACTGTTGTCCTTGGAAATGGGAAAACTTTCCAAGGTACTGGCATTAACTTCTCAAACCTTACTCGTTCAAAGATGTATCATCTTGTCTTTGGAGAGGAAGTTGCTGCCAAATTTGCCCCTGCTTCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAGTTGCAGGAAACATTGTTGTTTGTGTTAATGATGATCCAAATATTTCAAGGAGAGTCAAGAAACTAGTTTTACAAGATGCAAGAGCCATGGGCATGATACTCATTGATGAGGACAACAAAGATGTTTCCTTTGATGCAGGTGCATTTCCATTCACAGAAGTTGGAAATCTTGAAGGGTATCAGATCCTTGAGTACATAAATACTACTAAGAACCCAACTGCAACAATTCTTCCAACATCAGAAGTTCCTAGATATAGGCCTTCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAAGCCTTACAGAAAACATTCTCAAGCCAGATGTCATGGCTCCAGGTGTTGGAATTTTAGCTGCCATGATTCCCAAAACTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCTTTGTTTGGCATAAAATCTGGCACATCCATGGCTTGCCCACATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGAAGATGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGTCACAACCTACAACAACATGAGGAAGCCTGTGACCAACAGCTCAAACTACTTTGCCTACCCACATGAAATGGGAGTAGGGGAAATTAATCCACTTAGAGCTCTCAACCCTGGTTTAGTCTTTGAAACAGGTGTGGAAGACTATGTCAGATTCCTTTGTTATTATGGCTATTCAAAGAAAAACATAAGGTCAATGTCTAAGACTAATGTCACATGCCCAAGAGACTCCTCTGATGATCTTATCTCCAACATCAATTACCCATCAATCTCTACAAAATTACTTAAAAAACAAAAGAAACCAAAAGTGATCACAAGAACAGTTACCAATGTGGGATCCCTTAATGCCACATATACTGCAAAGGTGCATGCACCTGAGGGATTGGTTGTCAAGGTCATCCCCAACAAACTTGTGTTTTCTGAGGGTATTCAAAGAATGACCTATGAAGTCTCATTCTATGGCAAGGAAGCCCATGGTGGATACAATTTTGGGTCTCTAACTTGGCTTGATGGTCGACATTATGTTCATACAGTATTTGCAGCCAAAGTTGAATAA 2331 0.4088 MEWLLQFLHLLFLASLLICNTAISDQIPKPYVVYMGNSPPNNIGVDGQIPESAHMQLLSSIIPRKESERIALIHHYSHAFSGFSAMLTESEASALSGHDGVVSVFPDPILQLHTTRSWDFLQSDLGLKPRVTPLHQHSSSTHDIIIAVIDTGIWPESPSFSDVGMGKIPSKWKGVCMEGHDFKKSNCNRKLIGARYYKTQVTSGGNQTHIEAAKGSPRDSIGHGTHTASTAAGVQVNNASYYGLAKGTARGGSPSTRIAAYKTCSEEGCSGATILKAIDDAIRDGVDIISISIGLSSLMQSDFLDDPIAIGAFHAEQMGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTVVLGNGKTFQGTGINFSNLTRSKMYHLVFGEEVAAKFAPASEARNCYPGSLDYNKVAGNIVVCVNDDPNISRRVKKLVLQDARAMGMILIDEDNKDVSFDAGAFPFTEVGNLEGYQILEYINTTKNPTATILPTSEVPRYRPSPIVASFSSRGPSSLTENILKPDVMAPGVGILAAMIPKTDEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHGRWSPSMIKSALMTTVTTYNNMRKPVTNSSNYFAYPHEMGVGEINPLRALNPGLVFETGVEDYVRFLCYYGYSKKNIRSMSKTNVTCPRDSSDDLISNINYPSISTKLLKKQKKPKVITRTVTNVGSLNATYTAKVHAPEGLVVKVIPNKLVFSEGIQRMTYEVSFYGKEAHGGYNFGSLTWLDGRHYVHTVFAAKVE. 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09716 776 Gene3D - 352 496 - -
Seca4g09716 776 CDD PA_subtilisin_like 358 489 - -
Seca4g09716 776 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Seca4g09716 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Seca4g09716 776 Gene3D Peptidase S8/S53 domain 143 641 IPR036852 GO:0004252|GO:0006508
Seca4g09716 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 113 IPR037045 -
Seca4g09716 776 ProSiteProfiles Serine proteases, subtilase domain profile. 117 628 - -
Seca4g09716 776 CDD Peptidases_S8_3 110 593 IPR034197 -
Seca4g09716 776 Gene3D - 645 775 - -
Seca4g09716 776 FunFam Subtilisin-like protease SBT1.5 143 385 - -
Seca4g09716 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 768 IPR045051 -
Seca4g09716 776 Pfam Fibronectin type-III domain 676 769 IPR041469 -
Seca4g09716 776 Pfam Subtilase family 143 598 IPR000209 GO:0006508|GO:0008236
Seca4g09716 776 FunFam subtilisin-like protease SBT1.5 352 495 - -
Seca4g09716 776 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Seca4g09716 776 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Seca4g09716 776 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Seca4g09716 776 SUPERFAMILY Subtilisin-like 112 632 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09716 Seca-Chr4 228159266 228169327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09716 31 771 Subtilisin-like Serine Gene Family AT1G20150 43.668 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09716 K25898 - gmx:100781053 1292.33