Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09696 ATGGCAGAGGTCATCAACATTCCCCCTGATTCTCTCGACAAATCCCCTTCCTCTTCCGCTCCTCCTCCTCCTCCTCAGCCACAGCCTCCGTCCTCTTCCGCCGCCGATACCGATCTCCCTCCACCACCTCCTCCGCCGCCGTCACGGCGGAGGGACAGGAGGGATGACAGGGATTTCGATCGCCCACCTAACCGCCGCGGCGATTATTACGACCGGAACATGTCATCCCCGCCACCGCCCAGAGACAGGGACAGGGACTTCAAGCGCCGACGCAGCCCCAGCCCTTCCCACCGCGACCGCCGCTATTCTCCGCCGTCGCGGCGCTCTCCTCCCCCCTACAAGCGCTCGCGGAGGGGCAGTCCCCGCGGCGGTTACGGACCCGATGACAGTAGTCTCACCATGTGCAAGAGGAGAGATCATGTTAATCCAATCAGAATTGGATATGATTATTATGGTGGTTATGAACGGGGAATGGGTGGAAGAATTGGTTATGCAGATGACAAGTATTATGGCAGGTTTGGACCTCGTTCTGCCGGGGGATATCAAAATGGGATTTCCGATATGGAATCCAATCGTGGTTATGCAGACTTGCCAAGTGGCAGTGCACAAAGAGAAGGATTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTACCAGCTGAAGCAGAACGTAGGCAAGTTCTGGAAAATAATCTGTATCAAGAATATAAATCAGAGTATATTTCTACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCGACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGATGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTAAATCCTGGTTTGAGTGCATCTTCGTCCAGCAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGACACTGGAGGTAAACGAAGAAGACATGGTAGGGGATCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGTAAGTTCTGAACCTAGACGAATACAAGCTGATATTCAACAGGCTCAGGCCCTTGTTCGTAAGCTTGACACAGAAAAGGGGATTCAAGATAATGTTTTATGCAGCAGTGATCACAATAAAAATGATGATAAGGCTCATAGTGGATCTGTGGGTCCCATCATAATTATACGAGGCCTAACATCTGTTAAGGGCTTAGAGGGTGTTGAGCTTTTGGACACTCTTATTACATATCTTTGGCGAATCCATGGTGTAGATTATTATGGTATAATTGAGACTATTGAGGCTAAGGGTTTTAGGCATGCAAGGCCAGAGGGAACAGGGCATGAAGAAACAGGTAAATCAGGGTCCGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGCTGAATGGTCAAGATCCCTTGGAAGTAATGAGTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAAGTGTTGGATCCGTATGTTCGAAAAATTAGGGATGAAAAGTATGGGTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACGAAGCTTTTTCATGCTGCTGAATTTGTATACAAACATCTGAAGCTAAAACACCCAGAGCTTGTACTTGAACAAACTTCAAAAGTGCGTGAGGATCTCTATTTTCAAAATTACATGAATGACCTGGATGCTCCTGGTGGAAAGCCCGTCATGCAGCAACCTCAGAAGGACAAGCCCTTAAAGCGAAGATTAGGTCTCGAGGGCCGATTGAGAGATGACCGTGGTAATCGTCAAGACCATGATTGGAGTGACAGAATAAATGATGGAGATAGACCTGAGATTTCTCCATCCCGTGAAAGGTCTAAAGCACTTGAGATGGGAAACCATGATGAAACAATGTATGATACATATGCAGGGCCTGGTGTACCTCCATTCACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCATTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGCTAAGAGAGCAAGGAGGACCTTCTTCATATGATGCCTCTGGAAGAAAAATGCGGTCTGGCCCTCATATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTTAGACCAGATCCTCGGCGGATGCGAAGTTACCAAGACCTGGATGCCCCAGAGGACGAGGTCACTGTGATAGACTATAGGAGTTTGTAG 2253 0.4763 MAEVINIPPDSLDKSPSSSAPPPPPQPQPPSSSAADTDLPPPPPPPPSRRRDRRDDRDFDRPPNRRGDYYDRNMSSPPPPRDRDRDFKRRRSPSPSHRDRRYSPPSRRSPPPYKRSRRGSPRGGYGPDDSSLTMCKRRDHVNPIRIGYDYYGGYERGMGGRIGYADDKYYGRFGPRSAGGYQNGISDMESNRGYADLPSGSAQREGLMSYKQFIQELEDDILPAEAERRQVLENNLYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQMAKDFLLDLQSGTLDLNPGLSASSSSKSGQASEPNSEEEADTGGKRRRHGRGSNKENDFSAAPKAHPVSSEPRRIQADIQQAQALVRKLDTEKGIQDNVLCSSDHNKNDDKAHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGIIETIEAKGFRHARPEGTGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVMSAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVLEQTSKVREDLYFQNYMNDLDAPGGKPVMQQPQKDKPLKRRLGLEGRLRDDRGNRQDHDWSDRINDGDRPEISPSRERSKALEMGNHDETMYDTYAGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDASGRKMRSGPHMGGPAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL. 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09696 750 MobiDBLite consensus disorder prediction 570 627 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 301 321 - -
Seca4g09696 750 Coils Coil 214 234 - -
Seca4g09696 750 Pfam Arsenite-resistance protein 2 462 648 IPR007042 -
Seca4g09696 750 Pfam SERRATE/Ars2, N-terminal domain 211 299 IPR021933 -
Seca4g09696 750 MobiDBLite consensus disorder prediction 691 735 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 582 627 - -
Seca4g09696 750 ProSitePatterns Zinc finger C2H2 type domain signature. 522 545 IPR013087 -
Seca4g09696 750 PANTHER ARSENITE-RESISTANCE PROTEIN 2 49 748 IPR039727 GO:0006397
Seca4g09696 750 MobiDBLite consensus disorder prediction 77 105 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 47 68 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 322 339 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 301 359 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 15 46 - -
Seca4g09696 750 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09696 Seca-Chr4 227812979 227820051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09696 62 750 C2H2 Transcription Factor Family AT2G27100 62.181 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09696 K27103 - gmx:100788714 1020.76