Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09664 ATGGATGACAACATCACAACTATTGTCAATGTTATCAAATGGGGTCGTGCAGTATATACAAACATTCAAAAATTAGTGCAGTTTCAGTTAACAGTCATTATTGTTGCTCTGGTGATCAACTTTGTTTCAGCATCTATAGCAGGATATGTCCTCCTAACAGCTGTGCAGTTGCTTTGGGTCAACTTGATTATGGACATTCTGTGCGCATTAGCCATGGTCACTGAGCCACTTAATGATGGACTTATAAAAAGGCCCCCAGTTGGAAGGAGAGAAAATTTTATCACCAAAGCCATGTGGAGGAATATCATTGGCCAAAGCATATTTCAAGTAATTGTCCTTACCCTTCTCAATTTTGAAGGGAAGGATATACTGAGCATAAGTGGTTCAGATGCAACTGATGTACTCAGAACTTTGATATTCAACTCCTTTGTGTTTTTCCAGGTGTTCAATGAGATAAACTGCCGAGAGATAGAAAAGATAAACATTTTCAAAGGCATTCTTGACAGCTGGACATTTTTGGTAATAATTTTCTCAACAGTGGTAATTCAGGTAATCATAGTGCAGTTCCTCGGAACTTTTGCCTGCACGGTGCCTCTAAACTTGGAACTCTGGTTACTTAGTGTTTTAATTGGTGCCACTAGCATGCTTATAGCTTCTCTTCTGAAGTGCATCCCAGTGAAAAGAGATGTGGCTATTCACCATGAGGGTTATGAGGCACTGCCTCCACATCCCTAG 735 0.4014 MDDNITTIVNVIKWGRAVYTNIQKLVQFQLTVIIVALVINFVSASIAGYVLLTAVQLLWVNLIMDILCALAMVTEPLNDGLIKRPPVGRRENFITKAMWRNIIGQSIFQVIVLTLLNFEGKDILSISGSDATDVLRTLIFNSFVFFQVFNEINCREIEKINIFKGILDSWTFLVIIFSTVVIQVIIVQFLGTFACTVPLNLELWLLSVLIGATSMLIASLLKCIPVKRDVAIHHEGYEALPPHP. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09664 244 Gene3D - 1 118 - -
Seca4g09664 244 Gene3D - 119 235 - -
Seca4g09664 244 Pfam Cation transporting ATPase, C-terminus 51 223 IPR006068 -
Seca4g09664 244 FunFam Calcium-transporting ATPase 1 228 - -
Seca4g09664 244 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 227 IPR023298 -
Seca4g09664 244 PANTHER CATION TRANSPORTING ATPASE 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09664 Seca-Chr4 227344845 227347499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09664 1 244 Primary Pumps ATPases AT3G57330 65.984 1.55e-107 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09664 K01537 - lja:Lj0g3v0318659.2 429.483