Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09641 ATGGAACTACTAAGCTCCACACTCTACCTTCTTTTCACATTCGCTGCAATTCTCCTTCTTCCATATCTGATTGCAACAAGAATTATCAATAAAAAGAGCAAAACAAATTACTCCTCCAAACTTCCACCAGGACCTTCCCCTCTTCCCATCATAGGAAACCTTCTAAAGCTTGGAAACAAGCCCCACCACTCCCTAGCACAACTCTCAGACATTCACGGCCCAATAATGACCTTAAAATTGGGCCAAGTAACCACCATAGTCATATCCTCTGCTGACATGGCAAGAGAAGTTCTCCAAACCCATGACCTCTTACTCTCAAACAGAACCGTCCCTGATGCCTTAACCGTTCTCAACCATAACAAATACAGCCTGTCCTTCATGCGCGTCTCGCCACGTTGGCGTGACCTTAGAAAAATCTGTAACAACCAATTATTCGCTAATAAGACTCTTGATGCGAGCCAAGCCCTGAGGCGCAAGAAATTGCAAGATCTGTTGAGTGACATCAACAAGTGCAGTGAAATTGGTGAAGCTGTGGATATTGGAAGAGCGGCGTTTAAGACGACGATTAATTTGCTTTCCAACACTTTTTTCTCTGCGGATTTTGTGCATAATGCAGAGGAAGCTGGAGAGTATAAGGAGATTGTTGTTAGCATATTGAAGGAGGTTGGAGCACCGAACGTTTCTGATTTTTTCCCTTTGCTGAAGATTCTTGACTTGCAGGGTATTAGAAAAAGGTCAATTGTTTCTGTTAAGAAGGTGTTGACCATCTTCCGTCGGTTTGTTGGGGAGCGGTTGAAGATGAGAGAGGGAAGTGGTTCTACTGCGAATGATGATGTGTTGGATGCTTTGTTGAATATCTCTGAGGAGGATGGTGGCAAGATTGAGATGGACAAAGATGAGATTGAACATTTGTTGCTGAACATATTTGTTGCTGGAACCGACACAACAACATACACACTAGAATGGGCAATGGCAGAGCTAATTCACAATCCAAAGATTATGTCAAAAGTGGAGAAGGAGCTTGAGCAAGTAGTTGGCAAAGGCATCCCTGTGGAAGAAACCGATGTTGCTAGGCTTCCTTACTTGCAAGCAGTTATAAAAGAGACCTTCCGTTTGCATCCACCAGTTCCATTACTACTTCCTAGGAAGGCAGAGGTAGATGTTGAAATTGGAGGCTACATCATCCCAAAAGATGCACAAGTGTTGGTCAATGCATGGGTTATTGGTAGGGACCCAGCTAAATGGGACAATCCAAATGTGTTTCTACCAGAGAGGTTCTTGGACTCTGAAATTGACATTAAAGGTCACCACTTTGAGCTCATACCATTTGGGTCTGGAAGAAGAATTTGTCCCGGGTTGCCTTTGGCTAATAGGATGTTGCCTTTGATGTTGGGATCATTGGTCAATTGCTTTAATTGGAAACTTGAAGAAGGCATAAAGCTAGATGACTTGGACAAGGAAGATGAGTATGGGATTACCTTAGAAAAATCTCAACCAGTTCGTATCGTTCCAATCAAATTAACTAAGTAA 1530 0.4288 MELLSSTLYLLFTFAAILLLPYLIATRIINKKSKTNYSSKLPPGPSPLPIIGNLLKLGNKPHHSLAQLSDIHGPIMTLKLGQVTTIVISSADMAREVLQTHDLLLSNRTVPDALTVLNHNKYSLSFMRVSPRWRDLRKICNNQLFANKTLDASQALRRKKLQDLLSDINKCSEIGEAVDIGRAAFKTTINLLSNTFFSADFVHNAEEAGEYKEIVVSILKEVGAPNVSDFFPLLKILDLQGIRKRSIVSVKKVLTIFRRFVGERLKMREGSGSTANDDVLDALLNISEEDGGKIEMDKDEIEHLLLNIFVAGTDTTTYTLEWAMAELIHNPKIMSKVEKELEQVVGKGIPVEETDVARLPYLQAVIKETFRLHPPVPLLLPRKAEVDVEIGGYIIPKDAQVLVNAWVIGRDPAKWDNPNVFLPERFLDSEIDIKGHHFELIPFGSGRRICPGLPLANRMLPLMLGSLVNCFNWKLEEGIKLDDLDKEDEYGITLEKSQPVRIVPIKLTK. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09641 509 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 Pfam Cytochrome P450 42 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g09641 509 FunFam Cytochrome P450 76C4 33 503 - -
Seca4g09641 509 CDD CYP76-like 69 504 - -
Seca4g09641 509 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 506 - -
Seca4g09641 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09641 Seca-Chr4 226961852 226966561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09641 1 506 Cytochrome P450 AT2G45550 45.703 3.63e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09641 - - cave:132173603 607.831