Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09637 ATGTTGATATTAATTCTTGGACTAGCTTCAGCTGCTTTTTTAGTGATTGTTTCACTTTATGTCTTCTTTTACCGGAAAAGGCCATCAAATCATGAGGTTAAAGACATAGAAAGCTCAGAAGATAAGAAGGAAGAGATAGCTCAGAAGGAGGACTTGTTCACCTTTCAAGGTGGGGAGGACTTGACAATATGTGATGTATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAATTATGCCACACTGTATAAGGCTTTATTGCAGAGGAGCAACAAAGTGAGGCTGCTGAGGTTTCTGAGACCAGTATGCAGTACAAGAGCTGAAGAATTGGATCAAATGATTCAGTTTCTTGGAAGGATAAGGCATCCTAATTTGGTTCCCCTTCTGGGATTTTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTTTATAGGCATGGGAATCTGACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATATAGAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACAGGACATGAGAAGCCAATTATCCATGGAAACCTCAAGTCTAAAAACATCCTTTTGGATCGCTCCTACCAACCATACATCTCAGATTCAGGACTCCATCTTTTGTTGAATCCTACAGCTGGCCAAGAAATGCTTGAAAGTTCAGCTGCTCAGGGTTATAAGGCACCTGAGCTTATCAAAATGAAGGATGCTAGTGAAGATACTGATATATATAGCCTTGGGGTAATCTTTCTGGAGTTACTTTCAGGAAAGGAACCTATCAATGAGCATCCAACTCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCTGTCCTTGGACACAGAATTGCTGATTTATACCATCCAGCCATTCTTCTCAGAAACAGCAGAGATGATAAAATCCCAGTTACAGAAGAATGCATTCTCAAATTTTTCCAACTTGCTATGGCCTGTTGCTCCCCTTCACCTTTAATTAGACCTAACATAAAGCAAGTCATTAGGAAGCTTGAAGAAATTATACACTAG 1062 0.4002 MLILILGLASAAFLVIVSLYVFFYRKRPSNHEVKDIESSEDKKEEIAQKEDLFTFQGGEDLTICDVLDAPGEVIGKSNYATLYKALLQRSNKVRLLRFLRPVCSTRAEELDQMIQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNIYRISIGIAKGLEHLHTGHEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDASEDTDIYSLGVIFLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILLRNSRDDKIPVTEECILKFFQLAMACCSPSPLIRPNIKQVIRKLEEIIH. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09637 353 Gene3D Phosphorylase Kinase; domain 1 67 145 - -
Seca4g09637 353 ProSiteProfiles Protein kinase domain profile. 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g09637 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 42 351 - -
Seca4g09637 353 Pfam Protein tyrosine and serine/threonine kinase 72 348 IPR001245 GO:0004672|GO:0006468
Seca4g09637 353 SUPERFAMILY Protein kinase-like (PK-like) 71 349 IPR011009 -
Seca4g09637 353 Gene3D Transferase(Phosphotransferase) domain 1 147 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09637 Seca-Chr4 226901642 226904238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09637 25 351 Carbohydrate Esterase AT5G61570 59.226 8.54e-138 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca4g09637 PK_Tyr_Ser-Thr 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09637 - - gmx:100802295 621.698