Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09634 ATGTCATTTTCCTGTGCCAAAAAATTTTTCAAGAGGTTTTGGGTAGATGAATTCCACACAGGAAGTTTTCCATATAGCAGCTTTTTGTCTAATGATCTCTTACCATCCCTTGGAGCCAGAATCAACCAGGAAACTAGACTAAGAAGATGCATAATTTCCCCTTTCATTCCACAATATAGGGCTTGGGAGATGTTACTGATCATTCTAGTCATTTACTCTGCATGGATTTGCCCCTTTGAATTTGCCTTTCTGCCTTATAAACAAGACACACTATTCATCATTGACAACATTGTCAATGGCTTCTTTGCCATTGACATAGTGATGACATTCTTTGTTGCATATCTAGATAGCCATTCCTACCTTCTTGTTGACAATCCAAAGAAAATTGCAATCAGGTACATATCTACCTGGTTCATCTTTGATGTCTGTTCAACTGCACCTTTTCAACCCATCAGCCTCCTCTTCACTGATCACAGCAGTGAAATTGGCTTCAAAGTACTTAACATGCTTCGGTTATGGCGCTTGAGAAGAGTCAGTTCCCTGTTTGCAAGGTCCACCATCAATCATATTTCTGGATTTCTTCAAAATCTTGAAACTGTTAAGAGATATAACAGAACAGTGCTTACTAGCTCCTCTAATTTCCTTCAGACTTGA 654 0.3884 MSFSCAKKFFKRFWVDEFHTGSFPYSSFLSNDLLPSLGARINQETRLRRCIISPFIPQYRAWEMLLIILVIYSAWICPFEFAFLPYKQDTLFIIDNIVNGFFAIDIVMTFFVAYLDSHSYLLVDNPKKIAIRYISTWFIFDVCSTAPFQPISLLFTDHSSEIGFKVLNMLRLWRLRRVSSLFARSTINHISGFLQNLETVKRYNRTVLTSSSNFLQT. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09634 217 Gene3D - 59 214 - -
Seca4g09634 217 PANTHER POTASSIUM CHANNEL AKT1 26 185 IPR045319 GO:0005249|GO:0006813
Seca4g09634 217 Pfam Ion transport protein 60 185 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Seca4g09634 217 SUPERFAMILY Voltage-gated potassium channels 59 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09634 Seca-Chr4 226859978 226861555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09634 1 184 Ion Channels AT4G18290 77.717 2.93e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09634 K21867 - gmx:100800340 325.865