Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09560 ATGGATTGGATTCCTAGAGTTGGTAAGGAATTTGATGATCATGAAGAAGCCTGGCACTTTTGGGTAGAATATGGTTCAAAAATGGGTTTTGGAGTTAGAAAAGATTACTTTAACAAAAGGAAGGAAGATGACTCCATTACATCTTGTAGATTCGTTTGTTATAAGGAGGGGAAGAAGGACAAGAAGTCATCTTTGGTAAAAAAAAACCCAGGGCTGATACAAGAACTGAGTGCCAAGCAAAAATAG 246 0.374 MDWIPRVGKEFDDHEEAWHFWVEYGSKMGFGVRKDYFNKRKEDDSITSCRFVCYKEGKKDKKSSLVKKNPGLIQELSAKQK. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09560 81 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 69 - -
Seca4g09560 81 Pfam FAR1 DNA-binding domain 20 65 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09560 Seca-Chr4 225531026 225531271 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g09560 FAR1 8.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09560 - - aprc:113870350 92.0485