Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09554 ATGGTGGGCTCAGGAACAACAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCACGAGGCCCTCAGAAATGTATGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTCAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAATGGTAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGGGCTTCAGATTGTCTTGAAGAGCTTGATGGAGAGGATCCTGTCAGGAAATCCTTCAGCAAAATGTCAATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAGCCTAATATTTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCTGAATGGATAGATCAGTTTGAGTCAGGCATTCAGACAATAGCTGTAATTCAAGCTGGGCATGGCCTTCTTCAACTTGGTTCTTGCAAGATTATTCCTGAAGATCTCCATTTTGTGCTGAGAATGAGACACACTTTTGAATCACTAGGCTATCAATCTGGATTCTACCTCTCCCAACTCTTTTCTTCAACTAGGAACTCCTCCTCTTCTATTTCAATTCCTTCAAAACCATCCACCATTCCAATTGGTCCATCTCCTCCACTTCTCAACTGGGGTCAGAGGCCAATTGGGTCTGCTACTTCTATGCTATCCTCTCCCAATTTTCAACATGCAGCCAGAATGGGGTTCCCACATGCCAAAGATGAGGCCCATATGTTTCTCATGCCTAATGCATCCGAAGCTGCAAGAAGGGAAGACATGATAGGGGAGCATGAAAAAAGTGACATAAAATGGCCAAATGGGTTGTCCTTCTTCAATGCACTCACTGGAAGAACTGATGATGCTAAGCTTTTGTTCAATCCAGAGAGCATGGGAAACAAACTAGGTGATCAGAATCTCCATCACCCTCTTAATCCAACTCCAAATTCAGCTGCCTCCAATGAGTTCTTGAGCTTAGATAGCCACCCAGAAGGGACAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACACTACCTGCAAGAGTGGCTTCTTCAACTTCATCTACTTCAATGGATCACCATCAACAAACAGCTATGGAGTATAGGAATTCAGGAGGGGGTATGTACCCGGATGTCATGGAGACCTTTTTAGAGTGA 1221 0.4496 MVGSGTTTDRSKEAVGMMALHEALRNVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRASDCLEELDGEDPVRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSISIPSKPSTIPIGPSPPLLNWGQRPIGSATSMLSSPNFQHAARMGFPHAKDEAHMFLMPNASEAARREDMIGEHEKSDIKWPNGLSFFNALTGRTDDAKLLFNPESMGNKLGDQNLHHPLNPTPNSAASNEFLSLDSHPEGTRKMDKFKRSFTLPARVASSTSSTSMDHHQQTAMEYRNSGGGMYPDVMETFLE. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09554 406 MobiDBLite consensus disorder prediction 322 352 - -
Seca4g09554 406 PANTHER GB|AAF34833.1 1 406 IPR044170 -
Seca4g09554 406 MobiDBLite consensus disorder prediction 328 348 - -
Seca4g09554 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 188 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09554 Seca-Chr4 225412288 225414919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09554 21 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 29.851 1.43e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09554 - - gmx:100789006 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09554 4 225412288 225414919 Seca4g09554 4 225412288 225414919 ECH