Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09471 ATGGCAATTTGTAGTCGTCAATTGTCCACTTTCCCTGCTTTCTTCTGCCTTGCTCTTCTCCTTTTTGCTGCTACCGAGGTTCATATTGGTAATGCTGAAGCAATTTGTGGAAAGCCTAGTGGAACATTTTCAGGGACTTGTTTCAGCAGTGGCCAATGCGCTAACCAGTGCAAAGAGAGGGAGAATGCAGTAGGGGGTGCCTGTTACGTTTTGGCTTGTTACTGTTATTATGACTGTCATCGTGACTGA 249 0.4538 MAICSRQLSTFPAFFCLALLLFAATEVHIGNAEAICGKPSGTFSGTCFSSGQCANQCKERENAVGGACYVLACYCYYDCHRD. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09471 82 PANTHER DEFENSIN-LIKE PROTEIN 1 13 76 - -
Seca4g09471 82 Pfam Gamma-thionin family 35 79 - -
Seca4g09471 82 ProSitePatterns Gamma-thionins family signature. 34 57 IPR008176 GO:0006952
Seca4g09471 82 Gene3D - 31 79 IPR036574 -
Seca4g09471 82 SUPERFAMILY Scorpion toxin-like 35 79 IPR036574 -
Seca4g09471 82 SMART gth_4 35 79 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09471 Seca-Chr4 224228528 224229622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09471 14 79 Plant Defensins Gene Families AT2G26010 47.887 1.77e-11 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09471 - K25553 cit:127899058 59.6918