Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09463 ATGCTAGAATTTGCCAAGTGGACACCATTTGTTCTAGCTTTTCTTCTATATGCGGGTAAGGAATCATTTGCCTCATCATTCACTCCCATTGATAATTATTTAGTAGCTTGTGGTTCATCCAACAGCATCAATTTTAAGGGTCGAACTTTCATTCCTGACTCTGAACATCCCAACGTTGAAATAATAGCCAACACATCTATGACCATTACCTCTAAACTCACTGTCCCTTCTCCACTCTATCAATCAGCTAGACTCTTCTCAGGAAATGCATCATATCTATTCAAAATTCAACAACATGGGAGGCATTGGATCCGCCTCTATTTTCAACCTTTTCCTGATTCCAACCACAACATGACCTTTGCCTCAATAACAGTAGTCACTGATAGTTTTGTACTTCTCAATAATTTCACTTTCAAGAACTATAGTGACTCTCACTTGTTCAAAGAGTATGCAATCAACATTACATCAGATGAGTTACCTCTCACATTCATCCCACACAACAATTCACTTATCTTTGTTAATGCCATTGAAGTTGTGTCCATACCTGATGAGCTCTTCCCTGACCAAATAGTAGTGGCTGTAAATCCATCTAGCTTTTTTGAACAACTTCCAAAATCTGCCCTTGAAACAGTTTACCGGGTGAATGTAGGGGGTGCATTTCTAAGTGATGAGAATGACACCCTTGGAAGGATTTGGGAGAATGATGAAAACTACTTCCACTCAACCACTACTGCTCTTAACATTTCAACAAACCCTGCTGCAATAATGTTTCCTCCTGCTGTTACACCTTATACAGCACCACCATTAGTTTATGCCACAGCCAGAGCCATAGGGAATGCATCAGAAGGGTCCTATTTAAGTTGGGTCTTCACTATGGATCCAAACTTTCAGTATTTTGTTAGGGTGCATTTCTGTGACATAATTATCAAGTCAGTGTACACTGTGGGTTTCAATCTGTTTATAAATGGAGCATTTGCTGAGAAAAGTCTTGTCCTGTCATATTCTGTGCCATATTACACAGACTTCATCTCCCACTCCTCAGCAAACACTTTGAAAGTAAGTGTTAGTTTGGGTACAAAAGCAGACATGCTAAATGCAATCATGAATGGGTTGGAGATAATGAAAATCATCAAACATTTGGATGGGTTTTCCTCTATTCAGGGTTTTCATTCTAGCATAACAGGAAAAAAGAAGAGTGTTAGTGTTACTCATGATCCTAATTCTTTGCAAATTTTGGTATTACTTGGGCTATCATTTTGTTACTTGAAAGCTCGCAGGTTGAAGAAGAAATCAGCAATCACTTTTGAATTTCTGAGACATTTTACTTTCCATGAAATCCAACAAGCAACCAATGATTTTGATCCTAATCTGCTTATTGGAGAAGGAGGATTTGGCAAGAAGGCTCGCAGGCTGAAGAAGAAATCAGCAATCACTTTTGAATTTCTGAGACATTTTACTTTCCATGAAATCCAACAAGCAACCAATGATTTTGATCCTAATCTGCTTATTGGAGAAGGAGGATTTGGTAACGTCTATAAAGGAACACTAGAAAATGGGAAAACAGTGGCTATCAAAGTAGCAAATCCTGAATCCAGACAAGGTCTCAATGAATTCCACAACGAGATAGAGTTGTTATCTGGACTTCGTCATCAGAACCTTGTCTCTCTTGTAGGTTGCTGTAGTGAAGACTCAGAACTGATTCTAGTATACAACTTCATGGCAAATGGATCTCTTAGTAGTCATCTTTATGGGAGAGACTTTGTTCCTCTGTCATGGAAGCAACGCCTTGAAATATGCATTGGGGCTGCAAAGGGACTTTGTTATCTTCATATTGGAGCAAGGCAAGGCGTAATTCATCGTGATGTGAAGGCAGCAAACATTCTCTTGGATGAAAATCTTGTGCCAAAAGTTGCTGATTTTGGCATATCAAAGAAAGGTCCTCTTCTTGATAAGAGCCATGTGACAACCAATGTAAAGGGTAGCTTCGGGTATGTTGATCCTGAGTATTTTAGAACCAAGTATCTTACTAAGAAATCAGATGTTTACTCTTTTGGGGTGGTGTTGATTGAAGTTATCTGTGGCAAGCCTGCTTTAGATGATGCTCGTCCAACTCAGCAAATGAATTTGGCATTGTGGGCATTAAGCTGTCATGGAAAGGGGACTTTCTATGAAATGATGGATCCATATTTGAGTGGAAAAGTGAATATGGATTCTCTGAAAAAGGTCTCTGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGTGAACAGGCCACCAATGGGGTATGTATTGTGTGAACTTGAAGAGGCTCTCCACCTTGAGTTGGCATCACAAGTTTTGAATCATGAAGGGGACTCTGTCACCAATGCTAGTGTAGAAAATGGATTCACAGATGATATAGAAAATGTTGCTTGA 2415 0.3959 MLEFAKWTPFVLAFLLYAGKESFASSFTPIDNYLVACGSSNSINFKGRTFIPDSEHPNVEIIANTSMTITSKLTVPSPLYQSARLFSGNASYLFKIQQHGRHWIRLYFQPFPDSNHNMTFASITVVTDSFVLLNNFTFKNYSDSHLFKEYAINITSDELPLTFIPHNNSLIFVNAIEVVSIPDELFPDQIVVAVNPSSFFEQLPKSALETVYRVNVGGAFLSDENDTLGRIWENDENYFHSTTTALNISTNPAAIMFPPAVTPYTAPPLVYATARAIGNASEGSYLSWVFTMDPNFQYFVRVHFCDIIIKSVYTVGFNLFINGAFAEKSLVLSYSVPYYTDFISHSSANTLKVSVSLGTKADMLNAIMNGLEIMKIIKHLDGFSSIQGFHSSITGKKKSVSVTHDPNSLQILVLLGLSFCYLKARRLKKKSAITFEFLRHFTFHEIQQATNDFDPNLLIGEGGFGKKARRLKKKSAITFEFLRHFTFHEIQQATNDFDPNLLIGEGGFGNVYKGTLENGKTVAIKVANPESRQGLNEFHNEIELLSGLRHQNLVSLVGCCSEDSELILVYNFMANGSLSSHLYGRDFVPLSWKQRLEICIGAAKGLCYLHIGARQGVIHRDVKAANILLDENLVPKVADFGISKKGPLLDKSHVTTNVKGSFGYVDPEYFRTKYLTKKSDVYSFGVVLIEVICGKPALDDARPTQQMNLALWALSCHGKGTFYEMMDPYLSGKVNMDSLKKVSELAWKCLEERRVNRPPMGYVLCELEEALHLELASQVLNHEGDSVTNASVENGFTDDIENVA. 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09463 804 FunFam Receptor-like protein kinase FERONIA 573 789 - -
Seca4g09463 804 SMART serkin_6 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g09463 804 FunFam receptor-like protein kinase FERONIA 466 572 - -
Seca4g09463 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Seca4g09463 804 Gene3D - 206 377 - -
Seca4g09463 804 Gene3D - 32 181 - -
Seca4g09463 804 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Seca4g09463 804 CDD STKc_IRAK 503 764 - -
Seca4g09463 804 FunFam Putative receptor-like protein kinase 32 182 - -
Seca4g09463 804 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Seca4g09463 804 Gene3D Phosphorylase Kinase; domain 1 469 572 - -
Seca4g09463 804 Gene3D Phosphorylase Kinase; domain 1 423 468 - -
Seca4g09463 804 Pfam Malectin-like domain 36 376 IPR024788 -
Seca4g09463 804 Pfam Protein tyrosine and serine/threonine kinase 503 761 IPR001245 GO:0004672|GO:0006468
Seca4g09463 804 PANTHER OS07G0166700 PROTEIN 482 773 IPR045272 GO:0004714|GO:0006468
Seca4g09463 804 ProSiteProfiles Protein kinase domain profile. 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g09463 804 SUPERFAMILY Protein kinase-like (PK-like) 478 767 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09463 Seca-Chr4 224113803 224126217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09463 25 792 Receptor kinase-like Gene Family AT4G39110 41.740 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca4g09463 Malectin_like 1.2e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09463 - - jre:109013786 801.586