Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09452 ATGAGCTTGAGTATGAGCTACTGCGGCGGTTACGGCCTTCGACTTCAATCTTGCAGAATCGCAAACTGCAATTTTGACCGTGATACTCGTCATGGCAAGCAAATTGTTCCTATCAATGCGCACAAAAAACCTTCTGAACCTGAAAATTGTCTTCAGTCGAAGTGGAAGACTAATGGCAATAACATTGGGATGTTCATTGGTGCCATGACAGCGGCGCACTTGGTTGCTCCAGTCACTGCAAAAGCTGAAGTGGCTGCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAATGACTGGTTTGGAGGCTTTCTTTTTTCAGCTGGACAACAGGCTAATGAAGCTGTTCAGGGCCAACTATCCTCCCTCAGTTTCACTAGTTTGGCAGTAATTTATGGGGCTGGGCTTGTAACCAGCCTTTCTCCCTGCACACTTAGTGTGTTACCACTGACCCTCGGTTACATTGGGGCATTTGGCTCTGGCAAAAGCAAATCAGAGGTTATTGGAGATTCAATTGCATTTTCCTTAGGTCTTGCGACCACTTTAGCACTGTTGGGTATAGCAGCATCATTTGCAGGAAAGGCTTATGGACAGATTGGGCAAGGGTTACCTTTGGCTGCTTCTGGTTTGGCAGTAATTATGGGTCTGAACCTTCTTGAGATCATTGAATTACGACTCCCCTCATTCTTTGACAGTTTTGATCCACGTTCAGCGGCTGCCAATCTCCCATCAAGTGTGCAAGCATACCTGGCCGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTTGCCACTCTTCTGGGATATGTCGCTGCATCCAAGGATCCAGTAATAGGAGGAAGCTTACTTTTGACATACACAACTGGCTATGTTTCTCCCTTACTCCTGGCTGCTTCTTTTGCTGGAGCTTTACAGAGCTTGCTTTCATTTCGCAAGTACTCAGCATGGATCAATCCTATAAGCGGAGCAATGCTGTTAGGAGGTGGTGTATATACTTTCTTAGATAGACTGTTCCCAGTCACTATGGCAATGTAG 1044 0.4607 MSLSMSYCGGYGLRLQSCRIANCNFDRDTRHGKQIVPINAHKKPSEPENCLQSKWKTNGNNIGMFIGAMTAAHLVAPVTAKAEVAASIYALADGSLNDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKSEVIGDSIAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDSFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDRLFPVTMAM. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09452 347 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 121 346 - -
Seca4g09452 347 Pfam Cytochrome C biogenesis protein transmembrane region 131 337 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09452 Seca-Chr4 223948596 223953747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09452 1 347 Chloroplast and Mitochondria Gene Families AT5G54290 68.524 3.49e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09452 - - gmx:100815609 595.504