Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09448 ATGGCAGCAACATTGATGGCAGCCACAGCAAGCACTGGCACAGTTCTTAAACCAACTCCTTTCCTTGGCCAAACTAGGGGAACCAACACCAACCCTCTTAGAGATGTTGTCTCTCTTGGAGCTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTAGGACCCTTTTCAGCTCAGACTCCATCATACTTGACTGGAGAATTCCCAGGTGACTATGGATGGGACACTGCTGGGTTGTCTGCTGACCCTGAAGCATTTGCTAGGAACAGGGCTCTTGAGAAGGTGATCCATGGACGTTGGGCTATGCTTGGAGCACTAGGCTGCATCACCCCTGAAGTGCTTGAGAAATGGGTTAGAGTGGACTTCAAAGAACCAGTTTGGTTCAAAGCTGGAGCTCAGATATTCTCAGAAGGTGGCCTTGACTACTTGGGGAACCCCAACCTTGTTCATGCACAAAGCATCCTAGCAGTGCTAGGCTTCCAAGTTGTTCTGATGGGTCTTGTTGAAGGATTCCGTATCAATGGCCTTCCTGGTGTTGGAGAGGGTAACAATCTGTACCCTGGTGGTCAGTACTTTGACCCTCTTGGTCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGTAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTCCAAGCCATTGTGACTGGAAAAGGACCACTTGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTGCCCGGTTCTTAA 813 0.4822 MAATLMAATASTGTVLKPTPFLGQTRGTNTNPLRDVVSLGAGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEKVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09448 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 18 269 IPR001344 GO:0009765|GO:0016020
Seca4g09448 270 Gene3D Chlorophyll a/b binding protein domain 58 263 - -
Seca4g09448 270 FunFam Chlorophyll a-b binding protein, chloroplastic 58 263 - -
Seca4g09448 270 Pfam Chlorophyll A-B binding protein 68 236 IPR022796 -
Seca4g09448 270 SUPERFAMILY Chlorophyll a-b binding protein 50 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09448 Seca-Chr4 223882988 223884526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09448 14 269 Chloroplast and Mitochondria Gene Families AT2G05070 68.302 2.57e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09448 K08914 - cave:132175650 530.791