Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09445 ATGATGATGCAGATAGCGAGAGAAGGAGACCCAGTTCAAAGGATGCTATTTGTAGTGAGGGGTCACCTTCAGAGCAGCCAGGTGCTGAGGGATGGGGTGAAAAGTTGCTGCATGTTAGGACCTGGAAACTTCAGTGGGGATGAGCTTCTTTCATGGTGTTTGAGGAGGCCTTTCATAGAACGGCTTCCACTATCTTCATCCACACTCATCACATTGGAAACTACAGAGGCATTTGGTCTTGAAGCAGAGGATGTGAAGTATGTGACACAACATTTCAGGTACACGTTTGTAAAGGAAAAGGTGAAGAGAAGTGCCAGGTATTACTCACCAGGCTGGAGAACTTGGGCTGCTGTTGCCATTCAATTGGCTTGGAGAAGGTACAGGCATCGCTTGACTTTGACCTCATTGTCCTTTATAAGGCCTAGGAGACCCTTGTCACGATGTTCTTCCTTGGGAGAGGACAGGCTTCGCCTCTACACCGCTTTGTTAACTTCACCAAAGCCTAATCAGGATGATTTTGACTTTTGA 528 0.4697 MMMQIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPLSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDDFDF. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09445 175 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 140 - -
Seca4g09445 175 SUPERFAMILY cAMP-binding domain-like 5 92 IPR018490 -
Seca4g09445 175 Gene3D Jelly Rolls 2 94 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09445 Seca-Chr4 223830194 223830721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09445 5 174 Ion Channels AT5G54250 90.588 1.51e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09445 K05391 - egt:105948843 328.176