Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09383 ATGAAAAGAATAAGACATTATCTTAAGCTGTTAACTGAAACTCCACAAGGTCACACAAGGAAAATCTGCAGATGTTTCTGTAAGGGCACTCAGCTTTCTCCAAATCAGGATGATTCAACAGATGATTTTCCTGTGGTTTCACCAAGAATCAAACTCAGAGATGGGAGGCACTTGGCTTATATTGAAAGAGGTGTTCCCAAGGACATAGCAAAATACAAGATCATCATTGTCCATGGCTTTGGAAGCTCTAAAGAGATGAATTTTCTGGCACCCCAAGAATTAATAGATGAACTGGGTATATATCTTCTGCAATATGACCGGGCTGGATATGGAGAAAGTGATCCAAACCCCAAACGCTCATTGAAAAGTGAAGCACTTGACATTCAAGAGCTTGCTGATCAGCTAGAGATAGGTGCACAATTTTATGTGATTGGAGTCTCAATGGGTTCATATGCTACTTGGAGTTGTCTCAAGTATTTGCCCCACAGGCTTGCAGGGTTGGCACTGATAGCCCCTGTCATCAATTATAGGTGGCCTTCTCTTCCTGGGAGTCTCATAAGGGAGGATTACAGGAGGAAACTGGTGAGGTGGGCACTGTGGCTTGCAAATTACTGTCCTACACTATTGCATTGGTGGGTGACACAAAAGTGGCTCCCTTCAGCTGCTGTCATAGAAAAGAACCCAGCATTCTTTAACAAAAGTGATATAGATATTTTAAAGACAATTCCTGGGTTCCCAATGTTTACAAAGGACAGGTTAAGGGAACAGGTTGTTTTTGACACTCTTCGCCATGATTGGAGGGTTGCTTTTGGCAAATGGGAATTTGACCCTATGAAGCTAAGTAATCCATCCCCTCATAGTAGAAGTTCTTTTCACATTTGGCAAGGCTATGAAGATAAGGTTGTGCCCTCTGAACTCCAGAGATTTGTTTCAGGGAAGCTTCCTTGGATAAAATATCATGAAGTTCCAGATGGTGGCCATTTAATTGTATACTATAGGGGCTTGTGTGAGGCCATTTTGAAGGCACTTTTACTTGGACAAGAAAATCTTGCATATAGACCTAGAACATCATTATTTAGAAAATCTGTTCCATATGGGAAATTGTCTCAAGAATTAGCACCTTCATCTGCACCCATGGCTCTACAACAATCAGAGCAAGAGGAGCCATTGGAAGAAGAAGTACCTACACTTTCTCAACTGAACAACCAAAACTCAGTACTCTCACTTACCCTTGATGAATTCCAATGCAAGAGTGGAAAGAACTTTGGGTCCATGAACATGGATGAATTCCTTGCCAGCATTTTGAGCTCTGATGATAACCAAGTTAACCCACCATCTCCCCATGATGAAGCAGCTTCTCAGAGCAAAAGTGTTGCAACAGAACCCACCATTTCTACCCCTCAGCATGGCTCATTCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATCCATAAAGGCCAACCCCAAAAGAATAATGAAGCTAAAAACCTTGACAGAATTGAGAGACTCAAGAAGCAACAAACACTTGGGGAGATGACTTTGGAGGATTTCCTAATAAAAGCTGGTGTAGTACAAGCATCAACATTAACATCAAAGACTACTTCTCCTCAACCTAGAACTACAATGCCATTTCAGAATCAGACTGCAGGTAATAATACTGCACCACTTAATATACCATTGAATTCAAATTATGGATTGAGGCCTGCAATGGGGATAGGATTTTCTACTCAACATGATATAGGGAACTCTGTGTCTAGCAATGGCCTTGCAACATACCAAATGTTGTCACAGAATAACAGCTTAGTAATAAGGGACCCCCCTACAAGTTGTGCTGTAGAGAATTGTCAAAGCTTACAAGAATCAAGTGGGAGTGGTAGTAGGAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAGTGGAGCGAAGGCAACGCAGAATGTTGAAGAATAGAGAATCAGCAGCACGCTCTAGAGCAAGAAAACAGGCATATACGGTAGAGCTGGAAGCAGAGCTGAATCAGCTAAAACAAGAGAACGACAACCTAAAGAAATTTCTGGCTGAAGTCGAGCGCAAGAGAAAACAAGAGATTTCCCAGAGAAAGAATTTAACACAGGCTCAAAAGAGGACAGAAAAATTGAGGGCAATGGGGAAGCCTATAAGCGCATCCTGGTGA 2193 0.42 MKRIRHYLKLLTETPQGHTRKICRCFCKGTQLSPNQDDSTDDFPVVSPRIKLRDGRHLAYIERGVPKDIAKYKIIIVHGFGSSKEMNFLAPQELIDELGIYLLQYDRAGYGESDPNPKRSLKSEALDIQELADQLEIGAQFYVIGVSMGSYATWSCLKYLPHRLAGLALIAPVINYRWPSLPGSLIREDYRRKLVRWALWLANYCPTLLHWWVTQKWLPSAAVIEKNPAFFNKSDIDILKTIPGFPMFTKDRLREQVVFDTLRHDWRVAFGKWEFDPMKLSNPSPHSRSSFHIWQGYEDKVVPSELQRFVSGKLPWIKYHEVPDGGHLIVYYRGLCEAILKALLLGQENLAYRPRTSLFRKSVPYGKLSQELAPSSAPMALQQSEQEEPLEEEVPTLSQLNNQNSVLSLTLDEFQCKSGKNFGSMNMDEFLASILSSDDNQVNPPSPHDEAASQSKSVATEPTISTPQHGSFSVPPPICKKTVDEVWSEIHKGQPQKNNEAKNLDRIERLKKQQTLGEMTLEDFLIKAGVVQASTLTSKTTSPQPRTTMPFQNQTAGNNTAPLNIPLNSNYGLRPAMGIGFSTQHDIGNSVSSNGLATYQMLSQNNSLVIRDPPTSCAVENCQSLQESSGSGSRKRIIDGPPEVVVERRQRRMLKNRESAARSRARKQAYTVELEAELNQLKQENDNLKKFLAEVERKRKQEISQRKNLTQAQKRTEKLRAMGKPISASW. 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09383 730 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 651 666 IPR004827 GO:0003700|GO:0006355
Seca4g09383 730 SUPERFAMILY alpha/beta-Hydrolases 44 331 IPR029058 -
Seca4g09383 730 Pfam bZIP transcription factor 648 700 IPR004827 GO:0003700|GO:0006355
Seca4g09383 730 MobiDBLite consensus disorder prediction 537 559 - -
Seca4g09383 730 FunFam Alpha/beta-Hydrolases superfamily protein 44 344 - -
Seca4g09383 730 MobiDBLite consensus disorder prediction 437 472 - -
Seca4g09383 730 FunFam BZIP transcription factor 646 698 - -
Seca4g09383 730 MobiDBLite consensus disorder prediction 700 730 - -
Seca4g09383 730 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 20 347 - -
Seca4g09383 730 Gene3D - 646 702 - -
Seca4g09383 730 SUPERFAMILY Leucine zipper domain 648 697 IPR046347 GO:0003700|GO:0006355
Seca4g09383 730 Pfam Alpha/beta hydrolase family 74 329 IPR000073 -
Seca4g09383 730 CDD bZIP_plant_BZIP46 648 694 - -
Seca4g09383 730 Gene3D alpha/beta hydrolase 46 334 IPR029058 -
Seca4g09383 730 SMART brlzneu 644 708 IPR004827 GO:0003700|GO:0006355
Seca4g09383 730 MobiDBLite consensus disorder prediction 437 477 - -
Seca4g09383 730 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 646 698 IPR004827 GO:0003700|GO:0006355
Seca4g09383 730 Coils Coil 664 712 - -
Seca4g09383 730 MobiDBLite consensus disorder prediction 700 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09383 Seca-Chr4 222930522 222939144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09383 390 730 bZIP Transcription Factor Family AT3G44460 43.020 2.24e-64 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca4g09383 Abhydrolase_6 2e-10 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09383 - - gmx:100809863 669.077