Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09350 ATGCCATCGCACTGTAAGGTTCTTGTCCTCGTTCCAATTTTTCCTTCGTCTACTAAGGATCAAGTGAGGAAATTGTATTGTGTGAGTAGGGCTGTTCCAAATCTACCAATTAATCTCGAGGATGCAGCTCGAAGTGAAGTTGAGATTGAGAAGGCTCTTCAGTGCATTCCAACAGTTTCTGATCCTTTGGAGGCATACACTTGGCCTGAATATTTGAAATCTAGATGGAACTTAAATATTATACTTTCACGCCCAGGTTCTCTTCTTTCTTTTGAAAGCTCTGAAGCTTCACGTCATTTTGTCCCTCGGATTCATGTGGGAATGTGCTTTTCTCCACTTAATTGGGGGAAAACATCCAGACCAATTTCAGAAGGGTCATGTACATGTAGTGCGAGGCTGACCTCAGACGAGTATAAGGTTTCTAACTCGTGTTGGAAGTCTTAG 444 0.4234 MPSHCKVLVLVPIFPSSTKDQVRKLYCVSRAVPNLPINLEDAARSEVEIEKALQCIPTVSDPLEAYTWPEYLKSRWNLNIILSRPGSLLSFESSEASRHFVPRIHVGMCFSPLNWGKTSRPISEGSCTCSARLTSDEYKVSNSCWKS. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09350 147 Gene3D Cupin 15 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09350 Seca-Chr4 221856186 221857534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09350 70 115 JUMONJI Transcription Factor Family AT1G08620 50.000 1.71e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09350 - - gmx:100804864 105.145