Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09259 ATGGATAGCAGAGGCAGCAACCAAAGTCAATCTTCTGGTTTTGTATTACACAGCATCAAAGGTCGATGGTTCTCTCTTTATGCGGCATTTTTAATCATGGCAGGAAGCGGAACAGTATACTTATTTGGGACCTATTCCACAGAGCTAATTGTTAGCATAGGATATGATCAATCTGAACTCAGGAAATTAACCTTCTATAAAGACTTTGGTTCAAACTTTGCTGTGCTTAATGGCCTTCTTGCGGAGATAGCCCCATCATGGCTTCTCCTCCTCCTTAGTGCTGGTATGAATTTTTGGGGCTACTTCATGATATGGTTGGCCGTTACCAAGAAGATAGCCAAGCCTGAGATATGGCAAATGTGCTTCTTCATCTTTATAGGAGCCAACGCCCCAAACTTTTCAGGCACACGAGCTATTGTGACAAGCGTTAGAAATTTCCCAGAGAGCAGAGGTGTTGTATTGGGCCTTTTAAAGAGTTATATTGGATTAAGTGGACCCATCATCAGCCTATTGCATTGGGCCTTGTATGGAAAAGATCTCAAATCTCTAATCTTATTCATTGCATGGTTCCCTGCTTTCTTAGATATTGTGTTCATGTTGACATTTCGAGAAAAGAAGTTCACTAGGCAACCTCAAGAGATGAGGGTCTTCTATCATTACCTTTACGTATCAATTGGCATGGCAATGTTTGTGATGGTTATGACCATTTCTGAAAGGCATGTTAAATTCTCTTCAGTGAGCTATGTAGGAAGCGCTATGGTAGTCTTTGTATTCCTTTTCATCCTCCCTCTCTTAATCTCCCTTAGAGAAGAACATTTTGATTGGACCATAAACAATCCTTACTTCAAGACTAACAATAACATTGAGATTTCACGAGGAATTCAGTCCAAAGAGAATGGCTATGTAGGTGAAAGTAGAATCTCATCCTTCTTCAATAACATATGGAACAAACCAGGGAGAGGGGAAGACCACACTGTCTTACAAGCAATCTTAAGCACTGATATGATGTATTTATTTTTGACAACTGCTTGTGGATTAGGGGCAGGTTTGACCGCTATAAATAACTTAAAACAAATTGGTGAAGCACTAGGATACCCCACAGAAACCATACAAGCATTTGCATCTCTTATGAACATATGGAATTATGTAGGCAGAGTATACTCTGGTTTTGTATCTGAGTATTTGCTACGCAAATACAAAATCCCTCGTCCAGCCATGTTAACTTTTATGTTAGCCTTATCGAGCGTGGGGTACATCCTTATTGCATTTCCATTTCACGGTTCCATCTACTTGGCATGTGTCATCATTGGGTTCTCATACGGTTCACAGTTGCCATTAGTAAATGCAATCATTTCTGAGTTGTTTGGGCTCAAGCACTACTCGACCTTGTTCAATTGTGGCCAGTTTGCGAGCCCTCTAGGTGCATATATCTTGAATGTGAAGATTGTTCAACCTAATTACCAAAGGATGGCAGAGAGTTTAATAATGGATGAAACTAGTGTGGAGAATTTGATATGCTCGGGGGAGGTATGCTTCAAAGATTCTTTCACAGTTTTGGCATCTGTTGCAATCCTTGGAGGTTTTATTTCTCAAATTTTGATGGAAAGAACAAGGAAATTTTATGAGGGAGACATATATAAAAAGTTTAGAGATCCTCCTGCGGAGGAACAGACATCCCCTACTCGAGAAACTTCGTAA 1698 0.4011 MDSRGSNQSQSSGFVLHSIKGRWFSLYAAFLIMAGSGTVYLFGTYSTELIVSIGYDQSELRKLTFYKDFGSNFAVLNGLLAEIAPSWLLLLLSAGMNFWGYFMIWLAVTKKIAKPEIWQMCFFIFIGANAPNFSGTRAIVTSVRNFPESRGVVLGLLKSYIGLSGPIISLLHWALYGKDLKSLILFIAWFPAFLDIVFMLTFREKKFTRQPQEMRVFYHYLYVSIGMAMFVMVMTISERHVKFSSVSYVGSAMVVFVFLFILPLLISLREEHFDWTINNPYFKTNNNIEISRGIQSKENGYVGESRISSFFNNIWNKPGRGEDHTVLQAILSTDMMYLFLTTACGLGAGLTAINNLKQIGEALGYPTETIQAFASLMNIWNYVGRVYSGFVSEYLLRKYKIPRPAMLTFMLALSSVGYILIAFPFHGSIYLACVIIGFSYGSQLPLVNAIISELFGLKHYSTLFNCGQFASPLGAYILNVKIVQPNYQRMAESLIMDETSVENLICSGEVCFKDSFTVLASVAILGGFISQILMERTRKFYEGDIYKKFRDPPAEEQTSPTRETS. 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09259 565 SUPERFAMILY MFS general substrate transporter 220 539 IPR036259 -
Seca4g09259 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 544 - -
Seca4g09259 565 Pfam Nodulin-like 22 267 IPR010658 -
Seca4g09259 565 Gene3D MFS general substrate transporter like domains 332 540 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09259 Seca-Chr4 219806221 219807918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09259 8 556 Nodulin-like Gene Family AT2G28120 51.957 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09259 - - lja:Lj3g3v3053370.1 905.205