Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09232 ATGGAGTTTTCCAGTGAAGAAAATGCATACAAATTTTATTTTGCTTATGCAAAGTGTCATGACTTTATTATTAGGAGAGATGCTTTAGGTCGCGATAAGAATAAGAGAATGGTATGGAGACAGTTTTTATGCAACAGGGCTGGATTGAGGGACCCAAAGTACCTGATAGTAAAAGTGATCATAAACCTCTCACTCGTACCAACTGCAATGCTAGGTTGCAGGTTCGCCTTGACTATAGTACATCAAAATGGAAAGTGGTGGCATTTGATCCGGCTCAACCATGATTTAACCCCTCCGAAATTTGTGCCATGTATTTCTACCTATCGTGGCTTAAATGATGCAGACAAAGCTCAGGTGGAAGTCTTGCATTCCCATGGTGTTAGACTGTGTCAGATATTGGGGTACATGTTGGCCCAAAAAGGATGA 426 0.4108 MEFSSEENAYKFYFAYAKCHDFIIRRDALGRDKNKRMVWRQFLCNRAGLRDPKYLIVKVIINLSLVPTAMLGCRFALTIVHQNGKWWHLIRLNHDLTPPKFVPCISTYRGLNDADKAQVEVLHSHGVRLCQILGYMLAQKG. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09232 141 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 96 - -
Seca4g09232 141 Pfam FAR1 DNA-binding domain 11 93 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09232 Seca-Chr4 219044979 219045404 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g09232 FAR1 3.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09232 - - ccaj:109811679 130.183