Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09180 ATGCAACAGCTTGTGCTGCTAGCTTATTTCTTGGTAGAGTTGTCTTTGGTGGAATATGAGATGCTGAAGTTCAAACCATCTATGCTAGCTGCAGTTGCAGTCTACACAGCTCAATGCACTGTCAATGGTTTCAAAGACTGGAGTAAGACATGTGAATGGCATACAAACTACTCTAAAGATCAGCTATTGTAA 192 0.4062 MQQLVLLAYFLVELSLVEYEMLKFKPSMLAAVAVYTAQCTVNGFKDWSKTCEWHTNYSKDQLL. 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09180 63 Gene3D - 1 63 - -
Seca4g09180 63 Pfam Cyclin, C-terminal domain 5 62 IPR004367 -
Seca4g09180 63 SUPERFAMILY Cyclin-like 3 62 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09180 Seca-Chr4 217794246 217794437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09180 2 63 Core Cell Cycle Gene Families AT1G20610 61.290 2.44e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09180 K21777 - gmx:100779889 109.383