Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09147 ATGGGATTTGGAGTTAGAAAAATTACTTCAACAAAAGGAAGGAAGATGACTCCATTTCATCTTGTAGATGTTTATTATAAGGAGGGGAAGAAGAACAAGAAGTCATCTTTGGTTAAAAAGCCCATGGTTAACACAATAATTGGGTGTCAAGCAAGAATATCACTTCTTTTGAAAAATGGGAAGTTTGTAATTGATGAGTTTGTAGAGAATCATAACCACCTTTTACAACTTGTAGAAACAACACATGCCATCATCACATCGTAA 264 0.3409 MGFGVRKITSTKGRKMTPFHLVDVYYKEGKKNKKSSLVKKPMVNTIIGCQARISLLLKNGKFVIDEFVENHNHLLQLVETTHAIITS. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09147 87 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 75 - -
Seca4g09147 87 Pfam FAR1 DNA-binding domain 1 75 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09147 Seca-Chr4 217097265 217097528 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g09147 FAR1 1.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09147 - K17604 tpra:123886591 69.707