Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09124 ATGGAGGACAGTGGCCTTGAACCAATTGCATTTGCTTATAGACAAACACAGGTAGAAGAGCTTGAGCAAGATGAATTGATCTTGTTAGGACTAATAGCTTCTGAACTGGGAATAGATGTGACAGTAGATGGTATTATGCTTGAAGGAAAAGAATTTCAAGATTTGAATGCCAATGTTAGATCAGACAAAGTGGATCCAACCCTTGTAATGGGAAGTTTCCGTCCTGAAGACAAGCTTCTCATGGTACAATGCTTGCAAGACAAAGGTCATGTGGTTGCATTTGTTGGAAGAAGGTTGAGCCATACTTCAGTTCTAAAGGTAGCTGATGTAGGGATAGTTCATAACTCTCAGAGCAGAGAGAGAGAGAGGGAGAGAGACTACTTACAGAACGAGAGAGGGAGAGAGACTACTTACATAACGAGAGAGGGAGGGGACCAATTTGATGGGTTTCCAATCTTGAGGGCTGATTGGGCATAG 477 0.4277 MEDSGLEPIAFAYRQTQVEELEQDELILLGLIASELGIDVTVDGIMLEGKEFQDLNANVRSDKVDPTLVMGSFRPEDKLLMVQCLQDKGHVVAFVGRRLSHTSVLKVADVGIVHNSQSRERERERDYLQNERGRETTYITREGGDQFDGFPILRADWA. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09124 158 SUPERFAMILY HAD-like 31 115 IPR036412 -
Seca4g09124 158 PANTHER CATION TRANSPORTING ATPASE 25 120 - -
Seca4g09124 158 Gene3D - 14 126 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09124 Seca-Chr4 216513296 216513886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09124 18 124 Primary Pumps ATPases AT3G63380 36.036 7.31e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09124 K01537 - gmx:102661547 120.168