Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09065 ATGGGAAAGCATTTGATTCCTTCTGATCAGTCCACTGTTCAAACTCGGGACAATAATCCAGGATGCATGTGGGGCATACTTCATATTCTTGATTACCATCATTGGCGTGTCAAAAAGGTGCTTCCTCACAAAAGGAGACGACAAGCCAGATATAAGAAAAAAACCATTTTGCATATCCAAGATGAAGAAGACCAACAATATGGAGTTGCAGAAGGAGAACCCCTCCTGGTCGGGCAACATAGCAAAAAATTGAGTGCAACAGGAAAAAATTCTCCCAAAAATCTCAAAAAGGAACAACGATCTGAAAAAAGGGAGTATTCACTTCATCAAGAGAAAGATGGCAAGACACCAGAAGCTTCCCTTAACCATAAGCGTATGGAAACAACCAAGCTTAATAGAGACATTTCCAATAAATTTAAGAAACATACTGATGTTTTGGAGTTAATTAGTGTGGAGAAGGATTTATTGCTCAAATTTCTAAGAGATTTAGATGTTGGTGGGAAAATCTTTCATCAAGCTTCCCACAACAGATCAAGAAGATTGACAAAATCAGGGTCATTTCCTTTAACCGCACCTTCACCAGTGAAAAACTTCAGCTCTAGTACCTTCAAACACAAGCAATACGAAATTTGGGCCTTCCCCAAGAGAGAAAAGTTGCTTGCTGGTACTCAAGAACCAAATAATTCTGCATCCAGTTTTGTGAAAGATGTTTCTTATGAGAAGCCAATGCCTTCAGTGAATGATATTGGCTCAGATAGTGCCATGAAACAAAAACCAAGTGTTTCTTCAAGGGCTTCTGAAGGGTTAAATCACAAAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAATACATGCTCTTGTGGAGTTCAAAAAAAGTGGTTACCAACCTTCTATCCAAGCCATCCACCATAGAGCTTCACTTGAAAATAGCATCACCAATGATGAGAAAGAGATCTCACAAAGCTTAGATGATGGCATGGCTCAAGAACACAAAAAGAATAAAAGCTCCAATGAGACTAAAGCTTCTGAATATGATTCCAATAAACATGAAGCTCGCCTAATACGAAGAACTTCCTCTCTTAATGAATCGGTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGAAAAGATGACAAGTGGCAAAGTTCAAAGTCTAAAAGCTTAAGATTGACAAATGAGGATAAGATTCACAAGACTGGGCTTGCTCCTGTGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTTGAGTCCTTAGGCTTCATTTTACATGAGGCACTTTATGATACAAATGACATGGGGAACACAGTGGAAACTGATGATCATGTTCAAAGAAAATCAGGGAGCCTTCCTTTAAAGAATGACAAATCACTTGATCATATTAAAGAGGAAGAAATTGAGGAAACAGTAGAAGGGAGTGGCAAGGATGTGAATCCCAGTCCTTTATCTGATAAGATTGTGGAGAAAATTGATGAAGAAATTACCTGTGACCAAAAGGAGGACACACATGAGCCAGCGGTGGGAGATGAAAGTTTTCCTCAACAAAAAGAGGAAATAAGTATGACTTCCTATCTTAGCAATGAGGTGATGACATCTCTTGAAACTAGCTGTCAAGACAATACAACCAGCCATGCAGAAGGTAGAGAATTGAATACCAAAGGCTCCACATTGGCCGAATTGGAGACTGATTTACCAAGCAGAGAAAGTGCAACAACCAATGACACAAGCAAGAATCCTGACAATCATTTCCAGCTCTTCAAATCAGATGCAGACAATGATTTCAATTTCATATATGTGAAAAATGTTCTTGAACTTTCAGGCTTCATGAGAAATGAGCAGATTCAAATGCGATACTCAGTAGACCAGCCACTGAGGTCCTCCTTATTCATGGATTTGGATGCGGCTTTCCACAAGGATATTGAATCCTATGGAGAAGAGATCATCAACCCATATGATCACCAGCTTCTTTTTAACTTAGTTAATGAGGTGCTCCTTGAAATTTATGAGATTTCACCAACTTACTTCCCAAGGCCCTTCTCCTTCAACTACCACCTCCATCCAATGCCTAAGGGACACTATCTTCTTAAAGAAGTATGGAAAAGTGTTAATTCATACCTGAGCTTGAAACCAGAGCTAGATCAAACATTAGATGATGTAGTGGGTCGTGATTTGGCAAAAAGAAGTGGCTGGATGAACCTTCAACAGGAAGAGGAGTGTGTAGCACTTGAACTAGAGGAGATGATCATGGAAGATTTATTGGATGAAGTTATCTTCTCATGA 2301 0.3903 MGKHLIPSDQSTVQTRDNNPGCMWGILHILDYHHWRVKKVLPHKRRRQARYKKKTILHIQDEEDQQYGVAEGEPLLVGQHSKKLSATGKNSPKNLKKEQRSEKREYSLHQEKDGKTPEASLNHKRMETTKLNRDISNKFKKHTDVLELISVEKDLLLKFLRDLDVGGKIFHQASHNRSRRLTKSGSFPLTAPSPVKNFSSSTFKHKQYEIWAFPKREKLLAGTQEPNNSASSFVKDVSYEKPMPSVNDIGSDSAMKQKPSVSSRASEGLNHKGWNQLVLHQFKVIKQKIIHALVEFKKSGYQPSIQAIHHRASLENSITNDEKEISQSLDDGMAQEHKKNKSSNETKASEYDSNKHEARLIRRTSSLNESVDRYTQLFEKSFRKDDKWQSSKSKSLRLTNEDKIHKTGLAPVFSRSNLSMPNLESLGFILHEALYDTNDMGNTVETDDHVQRKSGSLPLKNDKSLDHIKEEEIEETVEGSGKDVNPSPLSDKIVEKIDEEITCDQKEDTHEPAVGDESFPQQKEEISMTSYLSNEVMTSLETSCQDNTTSHAEGRELNTKGSTLAELETDLPSRESATTNDTSKNPDNHFQLFKSDADNDFNFIYVKNVLELSGFMRNEQIQMRYSVDQPLRSSLFMDLDAAFHKDIESYGEEIINPYDHQLLFNLVNEVLLEIYEISPTYFPRPFSFNYHLHPMPKGHYLLKEVWKSVNSYLSLKPELDQTLDDVVGRDLAKRSGWMNLQQEEECVALELEEMIMEDLLDEVIFS. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09065 766 MobiDBLite consensus disorder prediction 504 518 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 93 124 - -
Seca4g09065 766 PANTHER PROTEIN TRM32 1 766 IPR044257 -
Seca4g09065 766 Pfam Protein of unknown function (DUF3741) 122 162 IPR022212 -
Seca4g09065 766 MobiDBLite consensus disorder prediction 572 589 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 250 267 - -
Seca4g09065 766 Pfam Domain of unknown function (DUF4378) 603 762 IPR025486 -
Seca4g09065 766 MobiDBLite consensus disorder prediction 330 357 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 504 524 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 570 589 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 245 267 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 79 124 - -
Seca4g09065 766 MobiDBLite consensus disorder prediction 543 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09065 Seca-Chr4 215548758 215553332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09065 140 756 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.752 8.50e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09065 - - gmx:100784103 977.237