Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09046 ATGGATAAAAGATCAGTTTATCCACAAGACGCAAGAAATCCTGTTTCCCTCAACAAAGAGAACGAGAGTGAGAGTAACCTCCATGCTACCCTTGCCAACATAAACCAAATGCTCATGGAAGATGACGTGGACGAGAATTACAGTATCTTCCAAGATTCCTTGGCTCTCCAACATGCTGAGAAATCATTTTATGAGGTTATTGGTGAGAACTACCCTCCTCCTTCTTCCCTCCAGTATCTTCCTTACAGTTACCCCACCGTGGATAGCCCTGACCAAAGTCTCTCCAGTACTTACAGTGATTATAGTTTTAGCAGTGGCACTTCCACCAGTACTGCTGATTCTGCAGAGTACAACCCCAACCCCCTTATTCCTCCACCCAATTTCCCCATTCCTCCTACTAACTATGTTTTTCAGCCCACCACCACAAATAATAGATTGGGGAATCCCATGGCTGGATTTCAAGATCCAACAATATTGCTTAGCGAGAGTGAGTTTCTTCAATTCAAGAGAGCCATGTTCCTCCCTAACCAATATCACAGTCCATTCATCATTGACCCTGCTTACACAAACACAGCCTTTTCCCCTTCTTTCAGAACGGTTCCTCAGGTGGTAATCAAGACAGAAGAAGAATTTTATGAAGAGGATGTGTCACAATGGAGGAAAATTCTCCACCAGGAAGATCAAGATCAAGATGAAGTAGAAGATGGGAGAAGCACAAGCATGGATGGCAATGAGTTAGCAGAATTGTTTGACAAGATTCTGCTGCTGGGAGCTACTCAGCAAACTGATGAATCAAGCACAAGTAGTTCTAGTGGTGGAAAGAGCCTTTTGAGGAGACAGAGCAATAGTGAGGAAGTTGTGGATTTGAGGACACTATTGCTGCTATGTGCACAAGCTATTTCTTCTAATGAACTTTCAACAGCTAACCAGTTGTTAAAGCAGATTAAGCAGCATTGTTCTAGAATGGGTGATGGGACTCAGAGATTGGCCTATTTCTTTGGGAATGCCCTTGAAGCACGCTTAGCTGGCACTGGTCCAATGATTTATAGTGCTTTATCTTCTAAGAAAAACACTGCTGCTGATATGATAAAAGCTTACCAAGTGTATGCCTCAGCTTGCCCATTTGATAAGCTTGCAATCATTTTTGCAAACAATTCAATTTGGAACAAAGCCAAGGAAGTTGAAACTCTTCACATTGTAGACTTTGGTGTTGGTTATGGCTTCAAATGGCCTGCCTTTATTAACCGTTTATCAAAAAGAGAAGGTGGGCCACCCAAGTTGCGCATCACAGGGATAGAGTTTCCACAACGTGGTTTAAGGATCCAGGAAACAGAGCATCGACTTGCAAGCTATTGCAATCGCTTCAATGTTCCATTTCAGTTCAATGCTATTGTACAGAGATGGGAAACCATCCAAGTTGAGGACCTCAATATAAAGGAAAATGAATTTGTGGCTGTCAATTGCTTGTTTCGCTTTGATAATCTACTTGATGAGACGGTTGTGATGGATGATCCAAGGGGTGCTGTTTTGAGTTTAATTAAGAAGGCAAATCCTGGCATATTTGTGCAGAGCATTGTTAATGGTTGTTATGATGCACCTTTCTTTGTGACACGGTTCAGAGAGGCTCTTTATCATTACTCAGCAATGTTTGACATGCTTGACAACAATGTTGCTCGTGAAGATCCTATGAGGTTGATGGTGGAGGAGGAGTTTTGTGGAAGGGAGATAGTTAATATCATAGCTTGTGAAGGTTGTGACAGGGTTGAGAGGCCAGGGACATACAAGCAATGGCAGTATAGGAACATGAGAGGTGGGTTTAGGCAGCTTCCCATGGATCACCAAATTATTAACAAATTAAGGGATAGGTTGAGAAATGATGCTTACAACAGTAATTTCATGCTTGAAGTGGATGGAAATTGGATGCTACAAGGTTGGAAGGGTCGAATTCTATATGCTTCCTCCTGTTGGGTACCAGAATAG 1980 0.4232 MDKRSVYPQDARNPVSLNKENESESNLHATLANINQMLMEDDVDENYSIFQDSLALQHAEKSFYEVIGENYPPPSSLQYLPYSYPTVDSPDQSLSSTYSDYSFSSGTSTSTADSAEYNPNPLIPPPNFPIPPTNYVFQPTTTNNRLGNPMAGFQDPTILLSESEFLQFKRAMFLPNQYHSPFIIDPAYTNTAFSPSFRTVPQVVIKTEEEFYEEDVSQWRKILHQEDQDQDEVEDGRSTSMDGNELAELFDKILLLGATQQTDESSTSSSSGGKSLLRRQSNSEEVVDLRTLLLLCAQAISSNELSTANQLLKQIKQHCSRMGDGTQRLAYFFGNALEARLAGTGPMIYSALSSKKNTAADMIKAYQVYASACPFDKLAIIFANNSIWNKAKEVETLHIVDFGVGYGFKWPAFINRLSKREGGPPKLRITGIEFPQRGLRIQETEHRLASYCNRFNVPFQFNAIVQRWETIQVEDLNIKENEFVAVNCLFRFDNLLDETVVMDDPRGAVLSLIKKANPGIFVQSIVNGCYDAPFFVTRFREALYHYSAMFDMLDNNVAREDPMRLMVEEEFCGREIVNIIACEGCDRVERPGTYKQWQYRNMRGGFRQLPMDHQIINKLRDRLRNDAYNSNFMLEVDGNWMLQGWKGRILYASSCWVPE. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09046 659 ProSiteProfiles GRAS family profile. 280 657 IPR005202 -
Seca4g09046 659 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 245 652 IPR005202 -
Seca4g09046 659 Pfam GRAS domain family 289 656 IPR005202 -
Seca4g09046 659 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09046 Seca-Chr4 215159724 215162149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09046 30 658 GRAS Transcription Factor Family AT1G07530 48.041 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca4g09046 GRAS 1e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09046 - - gmx:100780343 667.151