Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09045 ATGTCCACAGTGGCGGATCCTTCACTGGAAGACACAGATTTCTCAGAAACCGTCAAGTACATAAGCCAGATTCTTATGGAAGAGGACTTTGAGCAGAAACCATGTATGTGTTTTGACCCGCTGAGTCTAGAACACACTGAGAAAGCCTTCTATGATGCCCTTGAAGCTGAATTACCTCTTTCTCCTAATCAACACCCTCTTGACATTCTGGAGTTTCCCATTGGGAATTGTTCCACTGGCAGCGCCAATTCTCACGAGTTGAAGCCTCCTTCCCCTGATACTCCTGTTTCTGGTGATTCTGCTATGTTTTCCATTTCCCATACGCACTCTCAATTTGTTCCTCCGCATGCTTTGACTAATATTAGTGATGGGGTTTTGGATTTGGATTCTTCTGTAACCAAGATTTTGGCTCAAAATATCTTTAGTGATGAAAACTCTATGTTGCAGTTTAAAAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAAGACCTCAGCTTTTCACTGGTCTGGAGAAAAGCACAATGGCTGCAGAGCCAAAAAGAGAGGTTGGAGCCAAGATGGAGTATGGTGTTAGGGAGAATTCACATGGGGTGTTGAAGAGTAGAAATAGAAAGAATTCACATGAGCGCCAAGGTAGTGATGATGAGGAAGGAAGAAGCAACAAGCAGTCTGCTGTTTGTGTTGAAGAAGAGAGTGAAATATCTGAAATGTTTGATAGGGTTTTGCTTAGTGTTGAAAATGTGCCACTGTGTGTTGAACAAGAGGATGGATCAGTCATAGAGAATAACACACAGTCTGGTGAACAACCACATTCATCTGATGGAGGCAAGACTCGTTCTAAGAAACAAGGTAGGAAGAAGGAAGCAGTGGATTTGAGAACCCTTTTGATTCTGTGTGCACAAGCCTTGTCTGCCAATGACAACAGGACTGCTAATGAACTGCTAAAGCAGATTAGGCAGCATTCTTCTCCCTCAGGTGATGCACCACAGAGGTTGGCTTATTACTTTGCAAATGGCCTAGAAGCACGTTTGGTTGGTGCTGGTTCTAGAACCAAAATATTTTATATGAGCCTAAAGAAGTTCACTGCTGCTGATTTCCTGAAAGCTTACCAAGTTTTTATATCTGCTTGCCCTTTCAAAAAATTTGCTCATTTCTTTGCAAATAAAATGATTCTAAAGACAGCTGAAAAGGCAGAGACCCTTCATATTATTGATTTTGGTATTCTGTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAAAAGAAGTGGTGGACCTCCCAAGCTACGCATCACAGGAATAGAGTATCCCCAAGCTGGCTTTCGTCCTGCAGAAAGAATTGAGGAAACTGGTCGGCGTCTAGCTAAATATTGTGAGCGTTTCAATGTTCCATTTGAGTACAAGTCCATAGCATCACGAAACTGGGAAACCATTCCAATTGAAGATCTTGAAATTAAGAGCAATGAGGTACTTGCTGTGAACTGTCTGATAAGGTTTAAGAATTTACTTGATGAGACAATTGAAGTGAATAGTCCTAGAAATGCAGTTCTGAAGCTAATCAAGAACATAAATCCGGATATTTTTGTTCAATCCGTAGTAAATGGATCTTATAATGCCCCTTTCTTTGTCACACGCTTCAGGGAGGCACTTTTCCATTATTCTGCAATTTATGATATGTATGATACTCTCATATCCCGTGCAAATAAATGGAGGTTGATGATTGAAAGAGAGTTTTTGGGTCGGGAGATTATGAATGTTGTATCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACCAGGGCTGGTTTTAGGCAGCTCCAACTGGATAAGGAGCTAATAGACAAATTTAGAGGTATGTTCAGAGAATGGTACCACAGAGATTTTGTCTTTGATCAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGTCCAATTTTGGTCTTATCCTTCAATATGCTTTATACCAACTCCTTTCTGCAAGATTATGATGATCCTAACTCTGTATTTTCAAATCAGAACCCATTAACGAATGGGTTTGAGTTCGATGATTCATCTTCCCCTTCTTCTGGCACAAGCTCAAGTGGAGAATCCTCAGAATCTACTAAATATTCCAATCACATCCTCAGATACATAAGCGACATCCTCATGGATGAGGAAGATGACTTGGAGCGCAAACCCTGCATGTTGCAGGAATGTTTAAAACTCCAAGCTGCTGAAAAATCCTTCTATGATGTTCTTGCCCATCAAAAACCTGGTTGTTTCCGTGATGAAAACATAGATAGCCCAGACCCAGATGGGAATTATGGTCGCACTGCTAGTTCTGAGAGCAATAGCAGCTGCACCACTGATAACTCATATGAGTCTGATTGGGTCAACCTTGTGGGTGAATTTGACTCTTCTTTCCTACAATTACAAACCCCTCTAGTTGATTCCCCGGAGTCACAAGCTGCTGGCCATTTTCACAATGGAACCTGGAATTTCATTCAGTCTCAAAGCAAGCCAGTGATGGTTGAAGTGGGTTCATCAGGTTCAGCTTCAGCACCCAGAGAAAAGAGAAGTTATCAAATGGATGATACTTCTGATGAACAAGAGGGAAGAAGAGGTAGCAAGCTTTCAGCTGTCTTTTCTGACAATTCAGAACCACCAGAGATCTTAGATGAGGTACTGCTTTGTCAGCAAGGGAAAAGTCAACCCCTTTGTGCTGCTACTGAACCATCACAGAATGTTGATTCAGGAAGAGGATCCAATGGAAAAGCAGCACGTTCTCGTTCAAAGAAAGGGTCAACCAACACAGGTGCAACTGTAGATTTGTGGACCCTGCTAACTCAATGTGCACAGGCTGTTGCAAACTATGACCAAAGGAATGCAAATGACTTACTCAACCAGATTAGGCAACACTCTTCACCTTACCGGGATGCACTCCAGCGTTTAGCTCATTACTTTGCCAATGGCCTTGAGACAAGACTGGCTGCTGGGACCCCATCATATAAGCCCCTAGAAGTGGCAAATGCTGCTGATATGTTGAAAGCTTACAAACTATTTGTCACTGCATCTCCTTTGCAAAGGATGACAAATTTGTTCACAACCAGAACTATTATTAGTCTAGTGAAAAATGAGAGCAGTGTTCATATTATTGACTTTGGCATTTGCTATGGTTTCCAGTGGCCTTGCCTTATCAAAAGACTGTCACAAAGACCAGGTGGTCCTCCAAAGCTTCGTATAACAGGAATTGAACTTCCTCAGCCAGGATTTCGGCCTGCCGAAAGGGTGGAGGAGACAGGGCGGCGTCTGGGAAACTACTGCAAGAAGTTCAATGTTCCATTTGAATACAATTGCCTTGCACAGAAATGGGAAACTATCAGGCTTGAGGATCTCAAGATAGATAGGAGTGAAATAACTGTTGTTAGCTGTTTGTACCGGTTGAAGAACCTGCCTGATGAGACTGTGGCAGTGAACTGTCCAAGAGATGCTGTGTTGAAATTGATCAGGAGGATCAATCCAAACATCTTCTTCCATGGGATTGTCAATGGCACTTATAATGCACCATTTTTCCTGACTCGGTTTAGGGAGGCACTTTACCACTTTTCATCACTGTTTGATATGTTTGAGGCTAATGTGCTTTGTGAGGACCAAGAAAGGGTGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCCATCAATGTGATAGCAGGTGAGGGGGCAGAGAGGGTTGAGAGGCCTGAGACCTATAAGCAGTGGCAGGTTAGGAACCGTAGAGCTGGTTTCAAGCAAATCCGGTTGGATCCTGAATTGGTGAATCAATCCAAAGCAATGGTGAAAAGAGAATATCATAAAGATTTTGTAGTTGATGAGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTCTGAATGCTTTTTCTGCTTGGGTTCCTGCTTAA 3963 0.4242 MSTVADPSLEDTDFSETVKYISQILMEEDFEQKPCMCFDPLSLEHTEKAFYDALEAELPLSPNQHPLDILEFPIGNCSTGSANSHELKPPSPDTPVSGDSAMFSISHTHSQFVPPHALTNISDGVLDLDSSVTKILAQNIFSDENSMLQFKRGLEEASKFLPQRPQLFTGLEKSTMAAEPKREVGAKMEYGVRENSHGVLKSRNRKNSHERQGSDDEEGRSNKQSAVCVEEESEISEMFDRVLLSVENVPLCVEQEDGSVIENNTQSGEQPHSSDGGKTRSKKQGRKKEAVDLRTLLILCAQALSANDNRTANELLKQIRQHSSPSGDAPQRLAYYFANGLEARLVGAGSRTKIFYMSLKKFTAADFLKAYQVFISACPFKKFAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIKFLSKRSGGPPKLRITGIEYPQAGFRPAERIEETGRRLAKYCERFNVPFEYKSIASRNWETIPIEDLEIKSNEVLAVNCLIRFKNLLDETIEVNSPRNAVLKLIKNINPDIFVQSVVNGSYNAPFFVTRFREALFHYSAIYDMYDTLISRANKWRLMIEREFLGREIMNVVSCEGFERVERPETYKQWQVRNTRAGFRQLQLDKELIDKFRGMFREWYHRDFVFDQDNNWMLQGWKGPILVLSFNMLYTNSFLQDYDDPNSVFSNQNPLTNGFEFDDSSSPSSGTSSSGESSESTKYSNHILRYISDILMDEEDDLERKPCMLQECLKLQAAEKSFYDVLAHQKPGCFRDENIDSPDPDGNYGRTASSESNSSCTTDNSYESDWVNLVGEFDSSFLQLQTPLVDSPESQAAGHFHNGTWNFIQSQSKPVMVEVGSSGSASAPREKRSYQMDDTSDEQEGRRGSKLSAVFSDNSEPPEILDEVLLCQQGKSQPLCAATEPSQNVDSGRGSNGKAARSRSKKGSTNTGATVDLWTLLTQCAQAVANYDQRNANDLLNQIRQHSSPYRDALQRLAHYFANGLETRLAAGTPSYKPLEVANAADMLKAYKLFVTASPLQRMTNLFTTRTIISLVKNESSVHIIDFGICYGFQWPCLIKRLSQRPGGPPKLRITGIELPQPGFRPAERVEETGRRLGNYCKKFNVPFEYNCLAQKWETIRLEDLKIDRSEITVVSCLYRLKNLPDETVAVNCPRDAVLKLIRRINPNIFFHGIVNGTYNAPFFLTRFREALYHFSSLFDMFEANVLCEDQERVMLEKGLFGRDAINVIAGEGAERVERPETYKQWQVRNRRAGFKQIRLDPELVNQSKAMVKREYHKDFVVDEDGKWVLQGWKGRILNAFSAWVPA. 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09045 1320 MobiDBLite consensus disorder prediction 262 286 - -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 767 796 - -
Seca4g09045 1320 ProSiteProfiles GRAS family profile. 284 666 IPR005202 -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 914 943 - -
Seca4g09045 1320 ProSiteProfiles GRAS family profile. 941 1318 IPR005202 -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 176 227 - -
Seca4g09045 1320 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 241 656 IPR005202 -
Seca4g09045 1320 Pfam GRAS domain family 293 660 IPR005202 -
Seca4g09045 1320 Pfam GRAS domain family 952 1317 IPR005202 -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 780 796 - -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 864 881 - -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 849 891 - -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 174 229 - -
Seca4g09045 1320 MobiDBLite consensus disorder prediction 692 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09045 Seca-Chr4 215115134 215126440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09045 17 662 GRAS Transcription Factor Family AT1G07530 48.621 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca4g09045 GRAS 1.1e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09045 - - cam:101504630 1974.52